RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 HCFC2Q9Y5Z7 792 aa19.86■□□□□ 0.77
PCF11-206ENST00000533018 NEMFO60524 1076 aa19.85■□□□□ 0.77
PCF11-206ENST00000533018 CLASP2O75122 1294 aaKnown RBP19.85■□□□□ 0.77
PCF11-206ENST00000533018 GALTP07902 379 aa19.85■□□□□ 0.77
PCF11-206ENST00000533018 ATP2B1P20020 1258 aa19.85■□□□□ 0.77
PCF11-206ENST00000533018 NCBP1Q09161 790 aaKnown RBP19.85■□□□□ 0.77
PCF11-206ENST00000533018 ERICH6BQ5W0A0 696 aa19.85■□□□□ 0.77
PCF11-206ENST00000533018 TMEM173Q86WV6 379 aaPredicted RBP19.85■□□□□ 0.77
PCF11-206ENST00000533018 AUTS2Q8WXX7 1259 aa19.85■□□□□ 0.77
PCF11-206ENST00000533018 RSAD1Q9HA92 442 aa19.85■□□□□ 0.77
PCF11-206ENST00000533018 DNAJB4Q9UDY4 337 aa19.85■□□□□ 0.77
PCF11-206ENST00000533018 TECTAO75443 2155 aa19.85■□□□□ 0.77
PCF11-206ENST00000533018 TFDP1Q14186 410 aa19.84■□□□□ 0.77
PCF11-206ENST00000533018 MXD4Q14582 209 aaPredicted RBP19.84■□□□□ 0.77
PCF11-206ENST00000533018 AGMOQ6ZNB7 445 aa19.84■□□□□ 0.77
PCF11-206ENST00000533018 ZBTB33Q86T24 672 aa19.84■□□□□ 0.77
PCF11-206ENST00000533018 DDX53Q86TM3 631 aaKnown RBP19.84■□□□□ 0.77
PCF11-206ENST00000533018 ZNF280BQ86YH2 543 aa19.84■□□□□ 0.77
PCF11-206ENST00000533018 INO80B-WBP1J3KQ70 363 aa19.83■□□□□ 0.77
PCF11-206ENST00000533018 POMCP01189 267 aa19.83■□□□□ 0.77
PCF11-206ENST00000533018 ITGA4P13612 1032 aa19.83■□□□□ 0.77
PCF11-206ENST00000533018 HOXA11P31270 313 aaPredicted RBP19.83■□□□□ 0.77
PCF11-206ENST00000533018 SLC11A1P49279 550 aa19.83■□□□□ 0.77
PCF11-206ENST00000533018 ZXDAP98168 799 aa19.83■□□□□ 0.77
PCF11-206ENST00000533018 SAFBQ15424 915 aaKnown RBP eCLIP19.83■□□□□ 0.77
PCF11-206ENST00000533018 TRIM67Q6ZTA4 783 aa19.83■□□□□ 0.77
PCF11-206ENST00000533018 MRPL10Q7Z7H8 261 aaKnown RBP19.83■□□□□ 0.77
PCF11-206ENST00000533018 HSD17B14Q9BPX1 270 aa19.83■□□□□ 0.77
PCF11-206ENST00000533018 ZBP1Q9H171 429 aa19.83■□□□□ 0.77
PCF11-206ENST00000533018 KANSL3Q9P2N6 904 aa19.83■□□□□ 0.77
PCF11-206ENST00000533018 CNTNAP2Q9UHC6 1331 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 SPDYE4A6NLX3 237 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 DGAT1O75907 488 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 ALDH2P05091 517 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 SSBP05455 408 aaKnown RBP eCLIP19.82■□□□□ 0.76
PCF11-206ENST00000533018 CTSAP10619 480 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 AFF1P51825 1210 aaKnown RBP19.82■□□□□ 0.76
PCF11-206ENST00000533018 GUCY1B3Q02153 619 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 GIT2Q14161 759 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 UBXN11Q5T124 520 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 BCL7CQ8WUZ0 217 aaPredicted RBP19.82■□□□□ 0.76
PCF11-206ENST00000533018 PBXIP1Q96AQ6 731 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 CPB2Q96IY4 423 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 ADAM7Q9H2U9 754 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 XPNPEP1Q9NQW7 623 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 ANKEF1Q9NU02 776 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 CDH22Q9UJ99 828 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 FAN1Q9Y2M0 1017 aa19.82■□□□□ 0.76
PCF11-206ENST00000533018 A0A087WWV3 80 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 TMEM221A6NGB7 291 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 M0R296 226 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 WNT7AO00755 349 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 DDHD2O94830 711 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 SEC24BO95487 1268 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 WEE2P0C1S8 567 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 NCLP19338 710 aaKnown RBP19.81■□□□□ 0.76
PCF11-206ENST00000533018 AXLP30530 894 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 MCM7P33993 719 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 PTENP60484 403 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 ITIH3Q06033 890 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 RARS2Q5T160 578 aaKnown RBP19.81■□□□□ 0.76
PCF11-206ENST00000533018 NOTUMQ6P988 496 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 CNNM3Q8NE01 707 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 PIGOQ8TEQ8 1089 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 APOL6Q9BWW8 343 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 TRIM6Q9C030 488 aaPredicted RBP19.81■□□□□ 0.76
PCF11-206ENST00000533018 UBN1Q9NPG3 1134 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 NR2E1Q9Y466 385 aa19.81■□□□□ 0.76
PCF11-206ENST00000533018 MYO10Q9HD67 2058 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 POTEMA6NI47 508 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 B4GALT3O60512 393 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 TSPAN1O60635 241 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 LYPLA2O95372 231 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 RARRES1P49788 294 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 PCBP1Q15365 356 aaKnown RBP eCLIP19.8■□□□□ 0.76
PCF11-206ENST00000533018 MAEAQ7L5Y9 396 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 CCDC83Q8IWF9 413 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 C12orf76Q8N812 135 aaPredicted RBP19.8■□□□□ 0.76
PCF11-206ENST00000533018 ASAP3Q8TDY4 903 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 NECTIN4Q96NY8 510 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 MTMR9Q96QG7 549 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 EMILIN2Q9BXX0 1053 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 EIF2AQ9BY44 585 aaKnown RBP19.8■□□□□ 0.76
PCF11-206ENST00000533018 HES2Q9Y543 173 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 IPPQ9Y573 584 aa19.8■□□□□ 0.76
PCF11-206ENST00000533018 ZNF318Q5VUA4 2279 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 TDRD15B5MCY1 1934 aaKnown RBP19.79■□□□□ 0.76
PCF11-206ENST00000533018 NRP1O14786 923 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 USO1O60763 962 aaKnown RBP19.79■□□□□ 0.76
PCF11-206ENST00000533018 EPCAMP16422 314 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 KLRC2P26717 231 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 HOXD11P31277 338 aaPredicted RBP19.79■□□□□ 0.76
PCF11-206ENST00000533018 OR1G1P47890 313 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 CAPSQ13938 189 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 KANK3Q6NY19 840 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 CABP7Q86V35 215 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 SUGP1Q8IWZ8 645 aaKnown RBP19.79■□□□□ 0.76
PCF11-206ENST00000533018 SMG8Q8ND04 991 aaKnown RBP19.79■□□□□ 0.76
PCF11-206ENST00000533018 C8orf76Q96K31 380 aa19.79■□□□□ 0.76
PCF11-206ENST00000533018 FBXL18Q96ME1 805 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms