RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 SRGAP1Q7Z6B7 1085 aa19.09■□□□□ 0.65
RPUSD4-207ENST00000532800 SUGP1Q8IWZ8 645 aaKnown RBP19.09■□□□□ 0.65
RPUSD4-207ENST00000532800 FBXL6Q8N531 539 aa19.09■□□□□ 0.65
RPUSD4-207ENST00000532800 PGBD4Q96DM1 585 aa19.09■□□□□ 0.65
RPUSD4-207ENST00000532800 DDHD2O94830 711 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 LARGE1O95461 756 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 FDPSP14324 419 aaKnown RBP19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 AK2P54819 239 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 VCPP55072 806 aaKnown RBP19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 ITIH3Q06033 890 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 BMS1Q14692 1282 aaKnown RBP19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 XKR9Q5GH70 373 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 MRPL10Q7Z7H8 261 aaKnown RBP19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 ZBTB33Q86T24 672 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 NECAB1Q8N987 351 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 RNF149Q8NC42 400 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 URGCPQ8TCY9 931 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 TNFRSF25Q93038 417 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 PHOX2BQ99453 314 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 RSAD1Q9HA92 442 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 NR2E1Q9Y466 385 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 PPME1Q9Y570 386 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 IRAK3Q9Y616 596 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 MYO10Q9HD67 2058 aa19.08■□□□□ 0.64
RPUSD4-207ENST00000532800 DENND4AQ7Z401 1863 aa19.07■□□□□ 0.64
RPUSD4-207ENST00000532800 PTPN14Q15678 1187 aa19.07■□□□□ 0.64
RPUSD4-207ENST00000532800 FERMT3Q86UX7 667 aa19.07■□□□□ 0.64
RPUSD4-207ENST00000532800 TMEM87AQ8NBN3 555 aa19.07■□□□□ 0.64
RPUSD4-207ENST00000532800 SLC22A17Q8WUG5 538 aa19.07■□□□□ 0.64
RPUSD4-207ENST00000532800 NECTIN4Q96NY8 510 aa19.07■□□□□ 0.64
RPUSD4-207ENST00000532800 NAP1L4Q99733 375 aaKnown RBP19.07■□□□□ 0.64
RPUSD4-207ENST00000532800 ZSWIM4Q9H7M6 989 aa19.07■□□□□ 0.64
RPUSD4-207ENST00000532800 XPNPEP1Q9NQW7 623 aa19.07■□□□□ 0.64
RPUSD4-207ENST00000532800 WNT7AO00755 349 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 PDGFBP01127 241 aaPredicted RBP19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 POMCP01189 267 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 SSBP05455 408 aaKnown RBP eCLIP19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 KRT2P35908 639 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 MTHFRP42898 656 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 KIAA1841Q6NSI8 718 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 OTUD6AQ7L8S5 288 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 TPH2Q8IWU9 490 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 EXOC8Q8IYI6 725 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 KREMEN2Q8NCW0 462 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 TCP11Q8WWU5 503 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 MTRQ99707 1265 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 SMOC2Q9H3U7 446 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 DZANK1Q9NVP4 752 aa19.06■□□□□ 0.64
RPUSD4-207ENST00000532800 CNTNAP2Q9UHC6 1331 aa19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 CARNS1A5YM72 827 aa19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 GAS2O43903 313 aaKnown RBP19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 SLITRK3O94933 977 aa19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 FOSBP53539 338 aa19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 TCF15Q12870 199 aa19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 GIT2Q14161 759 aa19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 ME3Q16798 604 aa19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 SLFN12Q8IYM2 578 aa19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 SMG8Q8ND04 991 aaKnown RBP19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 WASF1Q92558 559 aa19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 RIPOR3Q96MK2 946 aa19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 EIF2AK1Q9BQI3 630 aaKnown RBP19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 EIF2AQ9BY44 585 aaKnown RBP19.05■□□□□ 0.64
RPUSD4-207ENST00000532800 C2orf16Q68DN1 1984 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 TSPAN1O60635 241 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 ERLIN2O94905 339 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 BAG4O95429 457 aaKnown RBP19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 BRD1O95696 1058 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 ASGR2P07307 311 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 NCLP19338 710 aaKnown RBP19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 ANAPC15P60006 121 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 TMC5Q6UXY8 1006 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 GTF3C6Q969F1 213 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 CPB2Q96IY4 423 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 FAM193BQ96PV7 902 aaPredicted RBP19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 TMEM175Q9BSA9 504 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 RNF39Q9H2S5 420 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 MARCH5Q9NX47 278 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 HES2Q9Y543 173 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 IPPQ9Y573 584 aa19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 TDRD15B5MCY1 1934 aaKnown RBP19.04■□□□□ 0.64
RPUSD4-207ENST00000532800 NRP1O14786 923 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 ASAP2O43150 1006 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 CNPP09543 421 aaKnown RBP19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 PTPN5P54829 565 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 PTENP60484 403 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 ANKRD1Q15327 319 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 CABP7Q86V35 215 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 TDRD5Q8NAT2 981 aaKnown RBP19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 NSUN7Q8NE18 718 aaKnown RBP19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 ASAP3Q8TDY4 903 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 KLHL5Q96PQ7 755 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 BRMS1Q9HCU9 246 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 DBR1Q9UK59 544 aaKnown RBP19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 SORCS3Q9UPU3 1222 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 FAN1Q9Y2M0 1017 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 PRG3Q9Y2Y8 225 aaPredicted RBP19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 PLXNA3P51805 1871 aa19.03■□□□□ 0.64
RPUSD4-207ENST00000532800 BTBD18B2RXH4 712 aa19.02■□□□□ 0.64
RPUSD4-207ENST00000532800 JAK2O60674 1132 aa19.02■□□□□ 0.64
RPUSD4-207ENST00000532800 ALDH2P05091 517 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms