RNA–Protein interactions for RNA: ENST00000532787.5

CTNND1-233, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-233ENST00000532787 ZNF18P17022 549 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 GRM4Q14833 912 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 STILQ15468 1287 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 MAPK6Q16659 721 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 ZC3H12BQ5HYM0 836 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 ZBTB41Q5SVQ8 909 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 KIAA1841Q6NSI8 718 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 C16orf89Q6UX73 402 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 SETD3Q86TU7 594 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 MOV10L1Q9BXT6 1211 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 OSBPL1AQ9BXW6 950 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 ROPN1BQ9BZX4 212 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 VPS11Q9H270 941 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 ROPN1Q9HAT0 212 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 NGRNQ9NPE2 291 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 SHROOM2Q13796 1616 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 SAMD9LQ8IVG5 1584 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 CLDN3O15551 220 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 MDH1P40925 334 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 PEX3P56589 373 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 NLRP11P59045 1033 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 TOB2Q14106 344 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 USPL1Q5W0Q7 1092 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 OR6B3Q8NGW1 331 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 KCNK16Q96T55 309 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 FTOQ9C0B1 505 aaKnown RBP eCLIP8.06□□□□□ -1.122e-18■□□□□ 11.2
CTNND1-233ENST00000532787 SMYD3Q9H7B4 428 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 SLAIN2Q9P270 581 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 CDV3Q9UKY7 258 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 DYTNA2CJ06 578 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 CCDC78A2IDD5 438 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 RTN2O75298 545 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 ECM2O94769 699 aaPredicted RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 ELF1P32519 619 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 PRCPP42785 496 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 TSPY1Q01534 308 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 PTK2BQ14289 1009 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 KRT33BQ14525 404 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 EFHC2Q5JST6 749 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 CCDC137Q6PK04 289 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 FAM47EQ6ZV65 393 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 ZNF555Q8NEP9 628 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 ATL2Q8NHH9 583 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 KRT35Q92764 455 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 RMDN2Q96LZ7 410 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 DACH2Q96NX9 599 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 ADA2Q9NZK5 511 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 EHD2Q9NZN4 543 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 MPP6Q9NZW5 540 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 SEPT3Q9UH03 358 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 LIMA1Q9UHB6 759 aaKnown RBP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.06□□□□□ -1.12
CTNND1-233ENST00000532787 GDAQ9Y2T3 454 aa8.06□□□□□ -1.12
CTNND1-233ENST00000532787 DTNBO60941 627 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 DAB1O75553 588 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 WBP4O75554 376 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 PPP1R37O75864 691 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 LARGE1O95461 756 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 APBA3O96018 575 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 CCND1P24385 295 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 RECQLP46063 649 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 HSPA13P48723 471 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 PDIA2Q13087 525 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 GRAPQ13588 217 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 CTTNQ14247 550 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 CLEC4GQ6UXB4 293 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 SFR1Q86XK3 245 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 RCOR2Q8IZ40 523 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 GRAPLQ8TC17 118 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 GIMAP4Q9NUV9 329 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 UVRAGQ9P2Y5 699 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 SAMD9Q5K651 1589 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 SSU72P8A0A1W2PR75 194 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 H7C1W4 665 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 APOA4P06727 396 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 P4HBP07237 508 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 ITIH2P19823 946 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 USP11P51784 963 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 GFPT1Q06210 699 aaPredicted RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 UBE2SQ16763 222 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 RWDD4Q6NW29 188 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 TTC23LQ6PF05 361 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 SLC26A7Q8TE54 656 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 EEF2KMTQ96G04 330 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 RANBP17Q9H2T7 1088 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 WDR35Q9P2L0 1181 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 USP6P35125 1406 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 EFCAB6Q5THR3 1501 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 GOLGA8IPA6NC78 632 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 H0Y3Z8 333 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 SORBS3O60504 671 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 DIAPH2O60879 1101 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 HUS1O60921 280 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 KLHL2O95198 593 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 HSPA1AP0DMV8 641 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 HSPA1BP0DMV9 641 aaKnown RBP8.05□□□□□ -1.12
CTNND1-233ENST00000532787 SLC16A2P36021 539 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 TSGA10IPQ3SY00 556 aa8.05□□□□□ -1.12
CTNND1-233ENST00000532787 IZUMO3Q5VZ72 239 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms