RNA–Protein interactions for RNA: ENST00000532451.1

SORL1-210, Transcript of sortilin related receptor 1, humanhuman

TSL 1 (best)

Gene SORL1, Length 2,165 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-210ENST00000532451 PALB2Q86YC2 1186 aa25.52■■□□□ 1.68
SORL1-210ENST00000532451 REPS2Q8NFH8 660 aa25.52■■□□□ 1.68
SORL1-210ENST00000532451 SENP7Q9BQF6 1050 aa25.52■■□□□ 1.68
SORL1-210ENST00000532451 FAM153AQ9UHL3 310 aa25.52■■□□□ 1.68
SORL1-210ENST00000532451 CNOT7Q9UIV1 285 aaKnown RBP25.52■■□□□ 1.68
SORL1-210ENST00000532451 TBX20Q9UMR3 447 aa25.52■■□□□ 1.68
SORL1-210ENST00000532451 GOLGA6CA6NDK9 693 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 GOLGA8KD6RF30 607 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 CCDC188H7C350 402 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 ADRB2P07550 413 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 NR3C2P08235 984 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 GOLGA6DP0CG33 693 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 SMTNP53814 917 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 ZNF280CQ8ND82 737 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 TMEM161BQ8NDZ6 487 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 SLC20A1Q8WUM9 679 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 HVCN1Q96D96 273 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 RUFY1Q96T51 708 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 AP1M1Q9BXS5 423 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 TMEM117Q9H0C3 514 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 THAP2Q9H0W7 228 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 GOLGA6AQ9NYA3 693 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 PCDHA10Q9Y5I2 948 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 GOLGA8IPA6NC78 632 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 GOLGA8JA6NMD2 632 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 CCDC169A6NNP5 214 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 MCCD1P59942 119 aaPredicted RBP25.51■■□□□ 1.67
SORL1-210ENST00000532451 MAP4K3Q8IVH8 894 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 MREGQ8N565 214 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 FAM76AQ8TAV0 307 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 WHAMMQ8TF30 809 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 ZNF112Q9UJU3 913 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 USP20Q9Y2K6 914 aa25.51■■□□□ 1.67
SORL1-210ENST00000532451 KRIT1O00522 736 aa25.5■■□□□ 1.67
SORL1-210ENST00000532451 NPTX2P47972 431 aa25.5■■□□□ 1.67
SORL1-210ENST00000532451 DMP1Q13316 513 aaPredicted RBP25.5■■□□□ 1.67
SORL1-210ENST00000532451 SNRNP48Q6IEG0 339 aaKnown RBP25.5■■□□□ 1.67
SORL1-210ENST00000532451 GJA3Q9Y6H8 435 aa25.5■■□□□ 1.67
SORL1-210ENST00000532451 MAFGO15525 162 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 RPS6KA5O75582 802 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 ZBTB7AO95365 584 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 PTPRAP18433 802 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 ADSSP30520 456 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 EIF1ADQ8N9N8 165 aaKnown RBP25.49■■□□□ 1.67
SORL1-210ENST00000532451 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.49■■□□□ 1.67
SORL1-210ENST00000532451 ZKSCAN4Q969J2 545 aaPredicted RBP25.49■■□□□ 1.67
SORL1-210ENST00000532451 ISCUQ9H1K1 167 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 PICK1Q9NRD5 415 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 ANKRD63C9JTQ0 380 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 OAZ1P54368 228 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 PPFIA1Q13136 1202 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 TRADDQ15628 312 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 SNRNP35Q16560 246 aaKnown RBP25.49■■□□□ 1.67
SORL1-210ENST00000532451 OTUD6AQ7L8S5 288 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 CBWD2Q8IUF1 395 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 ZIM3Q96PE6 472 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 KIFC3Q9BVG8 833 aa25.49■■□□□ 1.67
SORL1-210ENST00000532451 TAF1DQ9H5J8 278 aaPredicted RBP25.49■■□□□ 1.67
SORL1-210ENST00000532451 DDX3YO15523 660 aaKnown RBP25.48■■□□□ 1.67
SORL1-210ENST00000532451 SART1O43290 800 aaKnown RBP25.48■■□□□ 1.67
SORL1-210ENST00000532451 DSG3P32926 999 aa25.48■■□□□ 1.67
SORL1-210ENST00000532451 ERVK-9P63128 1117 aa25.48■■□□□ 1.67
SORL1-210ENST00000532451 C12orf42Q96LP6 360 aa25.48■■□□□ 1.67
SORL1-210ENST00000532451 WRNIP1Q96S55 665 aa25.48■■□□□ 1.67
SORL1-210ENST00000532451 GABBR1Q9UBS5 961 aa25.48■■□□□ 1.67
SORL1-210ENST00000532451 TTC7AQ9ULT0 858 aaPredicted RBP25.48■■□□□ 1.67
SORL1-210ENST00000532451 DIS3Q9Y2L1 958 aaKnown RBP25.48■■□□□ 1.67
SORL1-210ENST00000532451 GUCY2FP51841 1108 aa25.48■■□□□ 1.67
SORL1-210ENST00000532451 RHOT2Q8IXI1 618 aa25.48■■□□□ 1.67
SORL1-210ENST00000532451 KIFAP3Q92845 792 aa25.48■■□□□ 1.67
SORL1-210ENST00000532451 KAT5Q92993 513 aa25.48■■□□□ 1.67
SORL1-210ENST00000532451 KMT5AQ9NQR1 393 aa25.48■■□□□ 1.67
SORL1-210ENST00000532451 BRCA1P38398 1863 aaKnown RBP25.47■■□□□ 1.67
SORL1-210ENST00000532451 DENND3A2RUS2 1198 aa25.47■■□□□ 1.67
SORL1-210ENST00000532451 BHMG1C9JSJ3 638 aaPredicted RBP25.47■■□□□ 1.67
SORL1-210ENST00000532451 KCNA2P16389 499 aa25.47■■□□□ 1.67
SORL1-210ENST00000532451 CNGA1P29973 690 aa25.47■■□□□ 1.67
SORL1-210ENST00000532451 RPUSD2Q8IZ73 545 aaKnown RBP25.47■■□□□ 1.67
SORL1-210ENST00000532451 SPIRE2Q8WWL2 714 aa25.47■■□□□ 1.67
SORL1-210ENST00000532451 ATP6V0A1Q93050 837 aa25.47■■□□□ 1.67
SORL1-210ENST00000532451 SAAL1Q96ER3 474 aa25.47■■□□□ 1.67
SORL1-210ENST00000532451 CEP170P1Q96L14 293 aa25.47■■□□□ 1.67
SORL1-210ENST00000532451 DDX47Q9H0S4 455 aaKnown RBP25.47■■□□□ 1.67
SORL1-210ENST00000532451 ZNF214Q9UL59 606 aaPredicted RBP25.47■■□□□ 1.67
SORL1-210ENST00000532451 COG5Q9UP83 839 aa25.47■■□□□ 1.67
SORL1-210ENST00000532451 ZNF862O60290 1169 aa25.46■■□□□ 1.67
SORL1-210ENST00000532451 ITGA4P13612 1032 aa25.46■■□□□ 1.67
SORL1-210ENST00000532451 HMGCS2P54868 508 aa25.46■■□□□ 1.67
SORL1-210ENST00000532451 HADHBP55084 474 aaKnown RBP25.46■■□□□ 1.67
SORL1-210ENST00000532451 MAP2K1Q02750 393 aaPredicted RBP25.46■■□□□ 1.67
SORL1-210ENST00000532451 CUL1Q13616 776 aa25.46■■□□□ 1.67
SORL1-210ENST00000532451 CFAP58Q5T655 872 aa25.46■■□□□ 1.67
SORL1-210ENST00000532451 IQCKQ8N0W5 287 aa25.46■■□□□ 1.67
SORL1-210ENST00000532451 NSUN6Q8TEA1 469 aaKnown RBP25.46■■□□□ 1.67
SORL1-210ENST00000532451 BSNDQ8WZ55 320 aa25.46■■□□□ 1.67
SORL1-210ENST00000532451 SLITRK6Q9H5Y7 841 aa25.46■■□□□ 1.67
SORL1-210ENST00000532451 C17orf75Q9HAS0 396 aa25.46■■□□□ 1.67
SORL1-210ENST00000532451 ADAMTS5Q9UNA0 930 aa25.46■■□□□ 1.67
SORL1-210ENST00000532451 FAM170AA1A519 330 aa25.46■■□□□ 1.67
SORL1-210ENST00000532451 DKC1O60832 514 aaKnown RBP eCLIP25.46■■□□□ 1.679e-21■■■■■ 102.7
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms