RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 TIPINQ9BVW5 301 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 ANKZF1Q9H8Y5 726 aa16.53■□□□□ 0.24
SRPRA-206ENST00000532259 F8VZ95 297 aa16.52■□□□□ 0.24
SRPRA-206ENST00000532259 TCF7P36402 384 aaPredicted RBP16.52■□□□□ 0.24
SRPRA-206ENST00000532259 ALCAMQ13740 583 aa16.52■□□□□ 0.24
SRPRA-206ENST00000532259 INTS8Q75QN2 995 aaKnown RBP16.52■□□□□ 0.24
SRPRA-206ENST00000532259 ARHGEF19Q8IW93 802 aa16.52■□□□□ 0.24
SRPRA-206ENST00000532259 KAT5Q92993 513 aa16.52■□□□□ 0.24
SRPRA-206ENST00000532259 NOX5Q96PH1 765 aa16.52■□□□□ 0.24
SRPRA-206ENST00000532259 ALS2CR12Q96Q35 445 aa16.52■□□□□ 0.24
SRPRA-206ENST00000532259 NTPCRQ9BSD7 190 aaKnown RBP16.52■□□□□ 0.24
SRPRA-206ENST00000532259 UBE2TQ9NPD8 197 aaPredicted RBP16.52■□□□□ 0.24
SRPRA-206ENST00000532259 PDGFCQ9NRA1 345 aa16.52■□□□□ 0.24
SRPRA-206ENST00000532259 PALMO75781 387 aa16.52■□□□□ 0.23
SRPRA-206ENST00000532259 DLATP10515 647 aaKnown RBP16.52■□□□□ 0.23
SRPRA-206ENST00000532259 USP8P40818 1118 aa16.52■□□□□ 0.23
SRPRA-206ENST00000532259 GLYCTKQ8IVS8 523 aa16.52■□□□□ 0.23
SRPRA-206ENST00000532259 U2AF1L4Q8WU68 220 aaKnown RBP16.52■□□□□ 0.23
SRPRA-206ENST00000532259 ZBTB10Q96DT7 871 aa16.52■□□□□ 0.23
SRPRA-206ENST00000532259 MMP19Q99542 508 aa16.52■□□□□ 0.23
SRPRA-206ENST00000532259 APEX2Q9UBZ4 518 aa16.52■□□□□ 0.23
SRPRA-206ENST00000532259 STAT1P42224 750 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 MATR3P43243 847 aaKnown RBP eCLIP16.51■□□□□ 0.23
SRPRA-206ENST00000532259 GJC2Q5T442 439 aaPredicted RBP16.51■□□□□ 0.23
SRPRA-206ENST00000532259 LMBRD2Q68DH5 695 aaPredicted RBP16.51■□□□□ 0.23
SRPRA-206ENST00000532259 ALKBH5Q6P6C2 394 aaKnown RBP16.51■□□□□ 0.23
SRPRA-206ENST00000532259 C12orf56Q8IXR9 622 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 OLIG1Q8TAK6 271 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 ZNF668Q96K58 619 aaPredicted RBP16.51■□□□□ 0.23
SRPRA-206ENST00000532259 CEP89Q96ST8 783 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 NAGPAQ9UK23 515 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 JRKLQ9Y4A0 524 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 DNAH12Q6ZR08 3092 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 IGKV6D-21A0A0A0MT36 114 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 LRRIQ4A6NIV6 560 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 FOXN3O00409 490 aaPredicted RBP16.51■□□□□ 0.23
SRPRA-206ENST00000532259 PJA2O43164 708 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 EDN1P05305 212 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 SOX5P35711 763 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 NOP2P46087 812 aaKnown RBP16.51■□□□□ 0.23
SRPRA-206ENST00000532259 ERVK-9P63128 1117 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 C2orf54Q08AI8 447 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 MCPH1Q8NEM0 835 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 IFT74Q96LB3 600 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 TMEM117Q9H0C3 514 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 ACP6Q9NPH0 428 aa16.51■□□□□ 0.23
SRPRA-206ENST00000532259 ARGLU1Q9NWB6 273 aaPredicted RBP16.51■□□□□ 0.23
SRPRA-206ENST00000532259 DDX3XO00571 662 aaKnown RBP eCLIP16.5■□□□□ 0.231e-17■■■■□ 20.4
SRPRA-206ENST00000532259 DKC1O60832 514 aaKnown RBP eCLIP16.5■□□□□ 0.23
SRPRA-206ENST00000532259 GLRA2P23416 452 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 STAT5BP51692 787 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 WNT7BP56706 349 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 RNASE9P60153 205 aaKnown RBP16.5■□□□□ 0.23
SRPRA-206ENST00000532259 MYBPC2Q14324 1141 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 KCTD2Q14681 263 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 FASTKD5Q7L8L6 764 aaKnown RBP16.5■□□□□ 0.23
SRPRA-206ENST00000532259 SPIRE2Q8WWL2 714 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 SEMA4DQ92854 862 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 ZBTB45Q96K62 511 aaPredicted RBP16.5■□□□□ 0.23
SRPRA-206ENST00000532259 FAM213AQ9BRX8 229 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 DDX41Q9UJV9 622 aaKnown RBP16.5■□□□□ 0.23
SRPRA-206ENST00000532259 SNX12Q9UMY4 172 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 EXOC7Q9UPT5 735 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 DNAJC25-GNG10A0A024R161 153 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 ZMYND10O75800 440 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 SLC25A27O95847 323 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 OSBPP22059 807 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 MXI1P50539 228 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 SNAPC2Q13487 334 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 TUBB2AQ13885 445 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 PALB2Q86YC2 1186 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 MS4A14Q96JA4 679 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 TUBB2BQ9BVA1 445 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 STK33Q9BYT3 514 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 DHX33Q9H6R0 707 aaKnown RBP16.5■□□□□ 0.23
SRPRA-206ENST00000532259 ARHGAP28Q9P2N2 729 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 FBXL5Q9UKA1 691 aa16.5■□□□□ 0.23
SRPRA-206ENST00000532259 TTLL13PA6NNM8 815 aa16.49■□□□□ 0.23
SRPRA-206ENST00000532259 HARSP12081 509 aaKnown RBP16.49■□□□□ 0.23
SRPRA-206ENST00000532259 NAB2Q15742 525 aa16.49■□□□□ 0.23
SRPRA-206ENST00000532259 LNX1Q8TBB1 728 aaPredicted RBP16.49■□□□□ 0.23
SRPRA-206ENST00000532259 GLG1Q92896 1179 aa16.49■□□□□ 0.23
SRPRA-206ENST00000532259 HAPLN2Q9GZV7 340 aa16.49■□□□□ 0.23
SRPRA-206ENST00000532259 LUC7LQ9NQ29 371 aaKnown RBP16.49■□□□□ 0.23
SRPRA-206ENST00000532259 ZNFX1Q9P2E3 1918 aaKnown RBP16.49■□□□□ 0.23
SRPRA-206ENST00000532259 ANO9A1A5B4 782 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 LRRIQ3A6PVS8 624 aaPredicted RBP16.48■□□□□ 0.23
SRPRA-206ENST00000532259 ABCB4P21439 1286 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 PRKCIP41743 596 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 SEZ6Q53EL9 994 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 METTL7BQ6UX53 244 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 PPM1KQ8N3J5 372 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 TRAPPC12Q8WVT3 735 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 OSBPL9Q96SU4 736 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 TLR10Q9BXR5 811 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 SUGCTQ9HAC7 445 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 IQCA1LA6NCM1 817 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 FERP16591 822 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 ACOT2P49753 483 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms