RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ST3GAL1Q11201 340 aa18.75■□□□□ 0.59
CPSF1-207ENST00000531727 MXD4Q14582 209 aaPredicted RBP18.75■□□□□ 0.59
CPSF1-207ENST00000531727 PCBP1Q15365 356 aaKnown RBP eCLIP18.75■□□□□ 0.59
CPSF1-207ENST00000531727 TPRNQ4KMQ1 711 aa18.75■□□□□ 0.59
CPSF1-207ENST00000531727 HFE2Q6ZVN8 426 aa18.75■□□□□ 0.59
CPSF1-207ENST00000531727 VPS52Q8N1B4 723 aa18.75■□□□□ 0.59
CPSF1-207ENST00000531727 BCL7CQ8WUZ0 217 aaPredicted RBP18.75■□□□□ 0.59
CPSF1-207ENST00000531727 APOL5Q9BWW9 433 aa18.75■□□□□ 0.59
CPSF1-207ENST00000531727 GBP3Q9H0R5 595 aa18.75■□□□□ 0.59
CPSF1-207ENST00000531727 RSAD1Q9HA92 442 aa18.75■□□□□ 0.59
CPSF1-207ENST00000531727 DNAJB4Q9UDY4 337 aa18.75■□□□□ 0.59
CPSF1-207ENST00000531727 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.74■□□□□ 0.59
CPSF1-207ENST00000531727 ERLIN2O94905 339 aa18.74■□□□□ 0.59
CPSF1-207ENST00000531727 SEC24BO95487 1268 aa18.74■□□□□ 0.59
CPSF1-207ENST00000531727 CTSAP10619 480 aa18.74■□□□□ 0.59
CPSF1-207ENST00000531727 TXKP42681 527 aa18.74■□□□□ 0.59
CPSF1-207ENST00000531727 SLC11A1P49279 550 aa18.74■□□□□ 0.59
CPSF1-207ENST00000531727 GIT2Q14161 759 aa18.74■□□□□ 0.59
CPSF1-207ENST00000531727 ZNF280BQ86YH2 543 aa18.74■□□□□ 0.59
CPSF1-207ENST00000531727 IFNLR1Q8IU57 520 aaPredicted RBP18.74■□□□□ 0.59
CPSF1-207ENST00000531727 MTMR9Q96QG7 549 aa18.74■□□□□ 0.59
CPSF1-207ENST00000531727 IRAK3Q9Y616 596 aa18.74■□□□□ 0.59
CPSF1-207ENST00000531727 TRIOO75962 3097 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 B4GALT3O60512 393 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 DGAT1O75907 488 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 DDHD2O94830 711 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 NCLP19338 710 aaKnown RBP18.73■□□□□ 0.59
CPSF1-207ENST00000531727 AXLP30530 894 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 PTENP60484 403 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 ZXDAP98168 799 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 POU5F1BQ06416 359 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 TFDP1Q14186 410 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 CNNM3Q8NE01 707 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 AUTS2Q8WXX7 1259 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 CCDC43Q96MW1 224 aaKnown RBP18.73■□□□□ 0.59
CPSF1-207ENST00000531727 KANSL3Q9P2N6 904 aa18.73■□□□□ 0.59
CPSF1-207ENST00000531727 TSPAN1O60635 241 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 HOXD11P31277 338 aaPredicted RBP18.72■□□□□ 0.59
CPSF1-207ENST00000531727 AFF1P51825 1210 aaKnown RBP18.72■□□□□ 0.59
CPSF1-207ENST00000531727 ITIH3Q06033 890 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 CAPSQ13938 189 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 CES5AQ6NT32 575 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 TRIM67Q6ZTA4 783 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 TMEM87AQ8NBN3 555 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 SMG8Q8ND04 991 aaKnown RBP18.72■□□□□ 0.59
CPSF1-207ENST00000531727 CCDC51Q96ER9 411 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 MFSD14AQ96MC6 490 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 TMEM175Q9BSA9 504 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 VN1R3Q9BXE9 311 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 KCNH6Q9H252 994 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 ADAM7Q9H2U9 754 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 UBN1Q9NPG3 1134 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 DZANK1Q9NVP4 752 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 STK39Q9UEW8 545 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 LIMCH1Q9UPQ0 1083 aa18.72■□□□□ 0.59
CPSF1-207ENST00000531727 TMEM221A6NGB7 291 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 POTEMA6NI47 508 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 INO80B-WBP1J3KQ70 363 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 M0R296 226 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 XRCC6P12956 609 aaKnown RBP eCLIP18.71■□□□□ 0.59
CPSF1-207ENST00000531727 ITGA4P13612 1032 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 ARL2P36404 184 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 RARRES1P49788 294 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 GUCY1B3Q02153 619 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 MBTD1Q05BQ5 628 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 NCBP1Q09161 790 aaKnown RBP18.71■□□□□ 0.59
CPSF1-207ENST00000531727 SAFBQ15424 915 aaKnown RBP eCLIP18.71■□□□□ 0.59
CPSF1-207ENST00000531727 NOTUMQ6P988 496 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 BMP8AQ7Z5Y6 402 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 ASAP3Q8TDY4 903 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 PIGOQ8TEQ8 1089 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 CPB2Q96IY4 423 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 FAM193BQ96PV7 902 aaPredicted RBP18.71■□□□□ 0.59
CPSF1-207ENST00000531727 EIF2AQ9BY44 585 aaKnown RBP18.71■□□□□ 0.59
CPSF1-207ENST00000531727 NFKBIZQ9BYH8 718 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 TMEM60Q9H2L4 133 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 CDH22Q9UJ99 828 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 IPPQ9Y573 584 aa18.71■□□□□ 0.59
CPSF1-207ENST00000531727 INPPL1O15357 1258 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 ALDH2P05091 517 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 MCM7P33993 719 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 PTPN14Q15678 1187 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 AMHR2Q16671 573 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 CCDC83Q8IWF9 413 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 SLC22A17Q8WUG5 538 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 NECTIN4Q96NY8 510 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 CSRNP2Q9H175 543 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 POLR3FQ9H1D9 316 aaPredicted RBP18.7■□□□□ 0.58
CPSF1-207ENST00000531727 POMKQ9H5K3 350 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 TUFT1Q9NNX1 390 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 FAN1Q9Y2M0 1017 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 NR2E1Q9Y466 385 aa18.7■□□□□ 0.58
CPSF1-207ENST00000531727 NRP1O14786 923 aa18.69■□□□□ 0.58
CPSF1-207ENST00000531727 POMCP01189 267 aa18.69■□□□□ 0.58
CPSF1-207ENST00000531727 SPATA31C1P0DKV0 1188 aa18.69■□□□□ 0.58
CPSF1-207ENST00000531727 EPCAMP16422 314 aa18.69■□□□□ 0.58
CPSF1-207ENST00000531727 ATP2B1P20020 1258 aa18.69■□□□□ 0.58
CPSF1-207ENST00000531727 GLRA2P23416 452 aa18.69■□□□□ 0.58
CPSF1-207ENST00000531727 MTHFRP42898 656 aa18.69■□□□□ 0.58
CPSF1-207ENST00000531727 PTPN21Q16825 1174 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms