RNA–Protein interactions for RNA: ENST00000531579.5

NXF1-210, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-210ENST00000531579 KCNG4Q8TDN1 519 aa16.48■□□□□ 0.23
NXF1-210ENST00000531579 BSNDQ8WZ55 320 aa16.48■□□□□ 0.23
NXF1-210ENST00000531579 RAD54LQ92698 747 aa16.48■□□□□ 0.23
NXF1-210ENST00000531579 SYMPKQ92797 1274 aaKnown RBP16.48■□□□□ 0.23
NXF1-210ENST00000531579 CLIC6Q96NY7 704 aa16.48■□□□□ 0.23
NXF1-210ENST00000531579 CASD1Q96PB1 797 aa16.48■□□□□ 0.23
NXF1-210ENST00000531579 MRPL9Q9BYD2 267 aaKnown RBP16.48■□□□□ 0.23
NXF1-210ENST00000531579 TMEM134Q9H6X4 195 aa16.48■□□□□ 0.23
NXF1-210ENST00000531579 BLOC1S4Q9NUP1 217 aa16.48■□□□□ 0.23
NXF1-210ENST00000531579 TYW1Q9NV66 732 aaKnown RBP16.48■□□□□ 0.23
NXF1-210ENST00000531579 LARSQ9P2J5 1176 aaKnown RBP16.48■□□□□ 0.23
NXF1-210ENST00000531579 ODF2LQ9ULJ1 636 aa16.48■□□□□ 0.23
NXF1-210ENST00000531579 PCDHB12Q9Y5F1 795 aa16.48■□□□□ 0.23
NXF1-210ENST00000531579 MTCH2Q9Y6C9 303 aa16.48■□□□□ 0.23
NXF1-210ENST00000531579 MRPL42Q9Y6G3 142 aaKnown RBP16.48■□□□□ 0.23
NXF1-210ENST00000531579 CNTNAP2Q9UHC6 1331 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 EPOPA6NHQ4 379 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 CCDC169A6NNP5 214 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 LPXNO60711 386 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 CUTAO60888 179 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 ATF7P17544 494 aaPredicted RBP16.47■□□□□ 0.23
NXF1-210ENST00000531579 CTNNB1P35222 781 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 NPTX2P47972 431 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 PEX3P56589 373 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 PRPF4BQ13523 1007 aaKnown RBP16.47■□□□□ 0.23
NXF1-210ENST00000531579 SPECC1Q5M775 1068 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 UBXN11Q5T124 520 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 SPOUT1Q5T280 376 aaKnown RBP16.47■□□□□ 0.23
NXF1-210ENST00000531579 SLC27A1Q6PCB7 646 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 GLB1LQ6UWU2 654 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 USP49Q70CQ1 688 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 SPRED2Q7Z698 418 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 DAW1Q8N136 415 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 SPIRE2Q8WWL2 714 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 LARP4BQ92615 738 aaKnown RBP16.47■□□□□ 0.23
NXF1-210ENST00000531579 TRIM6Q9C030 488 aaPredicted RBP16.47■□□□□ 0.23
NXF1-210ENST00000531579 LMAN2LQ9H0V9 348 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 POLD4Q9HCU8 107 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 KMT5AQ9NQR1 393 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 KANSL3Q9P2N6 904 aa16.47■□□□□ 0.23
NXF1-210ENST00000531579 H0YCG3 227 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 ITGA4P13612 1032 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 PLS3P13797 630 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 LAG3P18627 525 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 GATMP50440 423 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 MAPK7Q13164 816 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 ARSHQ5FYA8 562 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 APBB1IPQ7Z5R6 666 aaPredicted RBP16.46■□□□□ 0.23
NXF1-210ENST00000531579 LRRC43Q8N309 656 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 CPB2Q96IY4 423 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 CCDC113Q9H0I3 377 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 RNF19AQ9NV58 838 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 RCOR1Q9UKL0 485 aa16.46■□□□□ 0.23
NXF1-210ENST00000531579 SFI1A8K8P3 1242 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 N4BP3O15049 544 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 OFD1O75665 1012 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 PRKCBP05771 671 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 KRT18P05783 430 aaKnown RBP16.45■□□□□ 0.22
NXF1-210ENST00000531579 ABCD1P33897 745 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 DNM1Q05193 864 aaKnown RBP16.45■□□□□ 0.22
NXF1-210ENST00000531579 DHX8Q14562 1220 aaKnown RBP16.45■□□□□ 0.22
NXF1-210ENST00000531579 MCM6Q14566 821 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 TMEM132AQ24JP5 1023 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 FOXD4L6Q3SYB3 417 aaPredicted RBP16.45■□□□□ 0.22
NXF1-210ENST00000531579 CLLU1OSQ5K130 101 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 FOXD4L3Q6VB84 417 aaPredicted RBP16.45■□□□□ 0.22
NXF1-210ENST00000531579 SV2BQ7L1I2 683 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 GPBP1Q86WP2 473 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 HELQQ8TDG4 1101 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 MRPL38Q96DV4 380 aaKnown RBP16.45■□□□□ 0.22
NXF1-210ENST00000531579 ADPGKQ9BRR6 497 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 CWH43Q9H720 699 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 ARHGAP28Q9P2N2 729 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 PLAGL2Q9UPG8 496 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 ZDHHC9Q9Y397 364 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 IPPQ9Y573 584 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 CHD9Q3L8U1 2897 aa16.45■□□□□ 0.22
NXF1-210ENST00000531579 B4GALT5O43286 388 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 KRT85P78386 507 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 NUCB2P80303 420 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 UBE3AQ05086 875 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 RAD51AP2Q09MP3 1159 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 GIT2Q14161 759 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 NOMO2Q5JPE7 1267 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 AGMOQ6ZNB7 445 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 LRRC55Q6ZSA7 311 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 SMG8Q8ND04 991 aaKnown RBP16.44■□□□□ 0.22
NXF1-210ENST00000531579 SLC17A8Q8NDX2 589 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 URGCPQ8TCY9 931 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 GDPD5Q8WTR4 605 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 KCNN1Q92952 543 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 EIF2AQ9BY44 585 aaKnown RBP16.44■□□□□ 0.22
NXF1-210ENST00000531579 LRRC27Q9C0I9 530 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 RSAD1Q9HA92 442 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 GIT1Q9Y2X7 761 aa16.44■□□□□ 0.22
NXF1-210ENST00000531579 PPM1AP35813 382 aa16.43■□□□□ 0.22
NXF1-210ENST00000531579 STAT6P42226 847 aa16.43■□□□□ 0.22
NXF1-210ENST00000531579 ME1P48163 572 aa16.43■□□□□ 0.22
NXF1-210ENST00000531579 ALDH7A1P49419 539 aaKnown RBP16.43■□□□□ 0.22
NXF1-210ENST00000531579 ZNF131P52739 623 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms