RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 OFD1O75665 1012 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 CSPG5O95196 566 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 F13A1P00488 732 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 ITGA4P13612 1032 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 PLCG1P19174 1290 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 PEX3P56589 373 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 PKP1Q13835 747 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 MCM6Q14566 821 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 CDCA2Q69YH5 1023 aaPredicted RBP15.98■□□□□ 0.15
FOXR1-202ENST00000531539 KRI1Q8N9T8 703 aaKnown RBP15.98■□□□□ 0.15
FOXR1-202ENST00000531539 MRPL38Q96DV4 380 aaKnown RBP15.98■□□□□ 0.15
FOXR1-202ENST00000531539 DRC1Q96MC2 740 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 KIFC3Q9BVG8 833 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 CCSER1Q9C0I3 900 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 CCDC39Q9UFE4 941 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 INPP5FQ9Y2H2 1132 aa15.98■□□□□ 0.15
FOXR1-202ENST00000531539 PRRC2BQ5JSZ5 2229 aaKnown RBP15.98■□□□□ 0.15
FOXR1-202ENST00000531539 CHD7Q9P2D1 2997 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 A0A1B0GUA9 196 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 K7ERI5 159 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 SPTLC2O15270 562 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 NPTXRO95502 500 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 ITGB1P05556 798 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 PRKCBP05771 671 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 GUCY2CP25092 1073 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 DDIT3P35638 169 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 NPTX2P47972 431 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 NASPP49321 788 aaPredicted RBP15.97■□□□□ 0.15
FOXR1-202ENST00000531539 EFNA5P52803 228 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 SLC12A3P55017 1021 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 CACNB1Q02641 598 aaPredicted RBP15.97■□□□□ 0.15
FOXR1-202ENST00000531539 PRPF4BQ13523 1007 aaKnown RBP15.97■□□□□ 0.15
FOXR1-202ENST00000531539 MAPK6Q16659 721 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 NAALADL2Q58DX5 795 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 ARSHQ5FYA8 562 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 GLB1LQ6UWU2 654 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 AGMOQ6ZNB7 445 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 THNSL1Q8IYQ7 743 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 DAW1Q8N136 415 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 COLGALT1Q8NBJ5 622 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 LINC00301Q8NCQ3 95 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 SMG8Q8ND04 991 aaKnown RBP15.97■□□□□ 0.15
FOXR1-202ENST00000531539 CNNM3Q8NE01 707 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 SPPL3Q8TCT6 385 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 SYMPKQ92797 1274 aaKnown RBP15.97■□□□□ 0.15
FOXR1-202ENST00000531539 P2RX5Q93086 422 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 TIPINQ9BVW5 301 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 APOL6Q9BWW8 343 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 TRIM6Q9C030 488 aaPredicted RBP15.97■□□□□ 0.15
FOXR1-202ENST00000531539 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 BLOC1S4Q9NUP1 217 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 HES2Q9Y543 173 aa15.97■□□□□ 0.15
FOXR1-202ENST00000531539 TTLL13PA6NNM8 815 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 ACKR2O00590 384 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 LAG3P18627 525 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 NCLP19338 710 aaKnown RBP15.96■□□□□ 0.15
FOXR1-202ENST00000531539 RNASELQ05823 741 aaKnown RBP15.96■□□□□ 0.15
FOXR1-202ENST00000531539 MAPK7Q13164 816 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 BECN1Q14457 450 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 FAM187BQ17R55 369 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 NOMO2Q5JPE7 1267 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 RRAGBQ5VZM2 374 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 SLC27A1Q6PCB7 646 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 PPP4R3CPQ6ZMV5 832 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 GPBP1Q86WP2 473 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.96■□□□□ 0.15
FOXR1-202ENST00000531539 LRRC15Q8TF66 581 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 RAD54LQ92698 747 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 CCDC51Q96ER9 411 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 PRIMPOLQ96LW4 560 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 KMT5AQ9NQR1 393 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 IPPQ9Y573 584 aa15.96■□□□□ 0.15
FOXR1-202ENST00000531539 SLC16A4O15374 487 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 KRT18P05783 430 aaKnown RBP15.95■□□□□ 0.14
FOXR1-202ENST00000531539 TXLNAP40222 546 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 PBX3P40426 434 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 DMP1Q13316 513 aaPredicted RBP15.95■□□□□ 0.14
FOXR1-202ENST00000531539 KCNT2Q6UVM3 1135 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 LRRC43Q8N309 656 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 MICAL1Q8TDZ2 1067 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 POF1BQ8WVV4 589 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 ZNF558Q96NG5 402 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 MRPL9Q9BYD2 267 aaKnown RBP15.95■□□□□ 0.14
FOXR1-202ENST00000531539 CCDC113Q9H0I3 377 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 GBP3Q9H0R5 595 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 LMAN2LQ9H0V9 348 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 RSAD1Q9HA92 442 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 UBN1Q9NPG3 1134 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 KCND2Q9NZV8 630 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 PARP2Q9UGN5 583 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 KCNG1Q9UIX4 513 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 COL4A6Q14031 1691 aa15.95■□□□□ 0.14
FOXR1-202ENST00000531539 NT5C1B-RDH14C9J2C7 533 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 N4BP3O15049 544 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 FGF18O76093 207 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 POMCP01189 267 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 PLS3P13797 630 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 AKAP5P24588 427 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 DNAJB1P25685 340 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 ALDH7A1P49419 539 aaKnown RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms