RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 CD4P01730 458 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 EDN1P05305 212 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 DARSP14868 501 aaKnown RBP20.89■□□□□ 0.94
SMPD1-205ENST00000531303 CAPN2P17655 700 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 ABCD1P33897 745 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 SNX17Q15036 470 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 LRRC26Q2I0M4 334 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 ZNF618Q5T7W0 954 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 SRGAP1Q7Z6B7 1085 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 RPAINQ86UA6 219 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 TMEM40Q8WWA1 233 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 BPIFA3Q9BQP9 254 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 TARS2Q9BW92 718 aaKnown RBP20.89■□□□□ 0.94
SMPD1-205ENST00000531303 NFKBIZQ9BYH8 718 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 GBP3Q9H0R5 595 aa20.89■□□□□ 0.94
SMPD1-205ENST00000531303 TYW1Q9NV66 732 aaKnown RBP20.89■□□□□ 0.94
SMPD1-205ENST00000531303 ANKRD63C9JTQ0 380 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 HNRNPDLO14979 420 aaKnown RBP20.88■□□□□ 0.93
SMPD1-205ENST00000531303 B4GALT5O43286 388 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 RPLP2P05387 115 aaKnown RBP20.88■□□□□ 0.93
SMPD1-205ENST00000531303 CKBP12277 381 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 EIF4BP23588 611 aaKnown RBP20.88■□□□□ 0.93
SMPD1-205ENST00000531303 LIG4P49917 911 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 MYL5Q02045 173 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 PRPF4BQ13523 1007 aaKnown RBP20.88■□□□□ 0.93
SMPD1-205ENST00000531303 IQCB1Q15051 598 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 TTI2Q6NXR4 508 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 ANKRD33Q7Z3H0 272 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 IFNLR1Q8IU57 520 aaPredicted RBP20.88■□□□□ 0.93
SMPD1-205ENST00000531303 FZD8Q9H461 694 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 CALUO43852 315 aaPredicted RBP20.88■□□□□ 0.93
SMPD1-205ENST00000531303 SCP2P22307 547 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 MGAT3Q09327 533 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 HSP90AA4PQ58FG1 418 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 HS2ST1Q7LGA3 356 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 CATSPER4Q7RTX7 472 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 ENOX1Q8TC92 643 aaKnown RBP20.88■□□□□ 0.93
SMPD1-205ENST00000531303 DUSP9Q99956 384 aaKnown RBP20.88■□□□□ 0.93
SMPD1-205ENST00000531303 MRPL4Q9BYD3 311 aaKnown RBP20.88■□□□□ 0.93
SMPD1-205ENST00000531303 PRMT7Q9NVM4 692 aaPredicted RBP20.88■□□□□ 0.93
SMPD1-205ENST00000531303 NFE2L3Q9Y4A8 694 aa20.88■□□□□ 0.93
SMPD1-205ENST00000531303 SMTNL1A8MU46 457 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 ACKR2O00590 384 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 PDXKO00764 312 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 ERLIN2O94905 339 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 MATR3P43243 847 aaKnown RBP eCLIP20.87■□□□□ 0.93
SMPD1-205ENST00000531303 LRRC63Q05C16 580 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 FAAP100Q0VG06 881 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 ZCWPW2Q504Y3 356 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 SPATA1Q5VX52 437 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 ZNF710Q8N1W2 664 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 CSGALNACT2Q8N6G5 542 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 NOC3LQ8WTT2 800 aaKnown RBP20.87■□□□□ 0.93
SMPD1-205ENST00000531303 CPB2Q96IY4 423 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 ZBTB45Q96K62 511 aaPredicted RBP20.87■□□□□ 0.93
SMPD1-205ENST00000531303 SRRTQ9BXP5 876 aaKnown RBP20.87■□□□□ 0.93
SMPD1-205ENST00000531303 PCIF1Q9H4Z3 704 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 AGPAT3Q9NRZ7 376 aa20.87■□□□□ 0.93
SMPD1-205ENST00000531303 NOC2LQ9Y3T9 749 aaKnown RBP20.87■□□□□ 0.93
SMPD1-205ENST00000531303 GOLGA6L19H0YKK7 550 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 NR3C1P04150 777 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 CYP2J2P51589 502 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 BFSP2Q13515 415 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 NCAPHQ15003 741 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 C1orf53Q5VUE5 145 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 SLC39A4Q6P5W5 647 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 CDR2LQ86X02 465 aaPredicted RBP20.86■□□□□ 0.93
SMPD1-205ENST00000531303 CREBRFQ8IUR6 639 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 CCDC155Q8N6L0 562 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 KCNN1Q92952 543 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 ABHD8Q96I13 439 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 TOX2Q96NM4 488 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 OSBPL7Q9BZF2 842 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 FANCLQ9NW38 375 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 ANKFY1Q9P2R3 1169 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 TRAF3IP3Q9Y228 551 aa20.86■□□□□ 0.93
SMPD1-205ENST00000531303 GHRP10912 638 aa20.85■□□□□ 0.93
SMPD1-205ENST00000531303 HARSP12081 509 aaKnown RBP20.85■□□□□ 0.93
SMPD1-205ENST00000531303 SFPQP23246 707 aaKnown RBP eCLIP20.85■□□□□ 0.93
SMPD1-205ENST00000531303 AMHR2Q16671 573 aa20.85■□□□□ 0.93
SMPD1-205ENST00000531303 FAM26DQ5JW98 314 aa20.85■□□□□ 0.93
SMPD1-205ENST00000531303 ATF7IP2Q5U623 682 aa20.85■□□□□ 0.93
SMPD1-205ENST00000531303 ARMCX5Q6P1M9 558 aa20.85■□□□□ 0.93
SMPD1-205ENST00000531303 ZBTB33Q86T24 672 aa20.85■□□□□ 0.93
SMPD1-205ENST00000531303 GOLGA5Q8TBA6 731 aa20.85■□□□□ 0.93
SMPD1-205ENST00000531303 CAGE1Q8TC20 777 aa20.85■□□□□ 0.93
SMPD1-205ENST00000531303 ACO2Q99798 780 aaKnown RBP20.85■□□□□ 0.93
SMPD1-205ENST00000531303 CBWD1Q9BRT8 395 aa20.85■□□□□ 0.93
SMPD1-205ENST00000531303 TCHPQ9BT92 498 aa20.85■□□□□ 0.93
SMPD1-205ENST00000531303 SAMSN1Q9NSI8 373 aaKnown RBP20.85■□□□□ 0.93
SMPD1-205ENST00000531303 CCDC85CA6NKD9 419 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 TULP1O00294 542 aaPredicted RBP20.84■□□□□ 0.93
SMPD1-205ENST00000531303 IKBKBO14920 756 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 TSPAN1O60635 241 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 CAND2O75155 1236 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 RPS6KA5O75582 802 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 NR2F2P24468 414 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 NFX1Q12986 1120 aaKnown RBP20.84■□□□□ 0.93
SMPD1-205ENST00000531303 ADAM9Q13443 819 aa20.84■□□□□ 0.93
SMPD1-205ENST00000531303 FAM187BQ17R55 369 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms