RNA–Protein interactions for RNA: ENST00000530727.5

PTPRC-214, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 1,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-214ENST00000530727 MYL1P05976 194 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 PTMSP20962 102 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 BDNFP23560 247 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 HSPA2P54652 639 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 LMOD3Q0VAK6 560 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 WDR78Q5VTH9 848 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 HDGFL2Q7Z4V5 671 aaPredicted RBP5.13□□□□□ -1.59
PTPRC-214ENST00000530727 NOSTRINQ8IVI9 506 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 TACO1Q9BSH4 297 aaKnown RBP5.13□□□□□ -1.59
PTPRC-214ENST00000530727 TMX4Q9H1E5 349 aaPredicted RBP5.13□□□□□ -1.59
PTPRC-214ENST00000530727 SAMD15Q9P1V8 674 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 DUSP10Q9Y6W6 482 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 USP54Q70EL1 1684 aa5.13□□□□□ -1.59
PTPRC-214ENST00000530727 MARF1Q9Y4F3 1742 aaKnown RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 BLMP54132 1417 aaPredicted RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 SHTN1A0MZ66 631 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 PRICKLE3O43900 615 aaPredicted RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 FOXD2O60548 495 aaPredicted RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 HIP1RO75146 1068 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 DNAJC8O75937 253 aaPredicted RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 SCGB1D2O95969 90 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 C4BPAP04003 597 aaKnown RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 CHGBP05060 677 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 MYCLP1P12525 358 aaPredicted RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 SYN1P17600 705 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 ATF3P18847 181 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 PABPC4Q13310 644 aaKnown RBP eCLIP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 VPS72Q15906 364 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 C10orf62Q5T681 223 aaPredicted RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 ZCCHC8Q6NZY4 707 aaKnown RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 LGI4Q8N135 537 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 SYNPOQ8N3V7 929 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 UBR7Q8N806 425 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 CXorf38Q8TB03 319 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 CHAC2Q8WUX2 184 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 BARX1Q9HBU1 254 aaPredicted RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 KCND1Q9NSA2 647 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 TNPO3Q9Y5L0 923 aaKnown RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 ACEP12821 1306 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 USP6P35125 1406 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 NCOA3Q9Y6Q9 1424 aa5.12□□□□□ -1.59
PTPRC-214ENST00000530727 COL3A1P02461 1466 aaPredicted RBP5.12□□□□□ -1.59
PTPRC-214ENST00000530727 ALG1L2C9J202 215 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 M0R2C6 588 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 FOSP01100 380 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-214ENST00000530727 COL6A1P12109 1028 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 PTGS1P23219 599 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 NFKB2Q00653 900 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 ZNF460Q14592 562 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 ZRSR2Q15696 482 aaKnown RBP5.11□□□□□ -1.59
PTPRC-214ENST00000530727 FSTL4Q6MZW2 842 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 PKN3Q6P5Z2 889 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 MORC1Q86VD1 984 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 THNSL2Q86YJ6 484 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 MYO1HQ8N1T3 1032 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 BDH2Q9BUT1 245 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 KCNH7Q9NS40 1196 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 FBXO9Q9UK97 447 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-214ENST00000530727 PLAAQ9Y263 795 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 ZBED9Q6R2W3 1325 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 PNPLA6Q8IY17 1366 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 KRT37O76014 449 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 IL18BPO95998 194 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 KNG1P01042 644 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 AOAHP28039 575 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 FLT3P36888 993 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 STAT3P40763 770 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 RAB27AP51159 221 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 HERVK_113P62684 666 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 IRF9Q00978 393 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 MCL1Q07820 350 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 SEC23AQ15436 765 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 CT47A1Q5JQC4 288 aaPredicted RBP5.11□□□□□ -1.59
PTPRC-214ENST00000530727 NUDT10Q8NFP7 164 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 NUDT11Q96G61 164 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 NAP1L4Q99733 375 aaKnown RBP5.11□□□□□ -1.59
PTPRC-214ENST00000530727 SENP7Q9BQF6 1050 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 INVSQ9Y283 1065 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 ZDHHC9Q9Y397 364 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 OVOS2A0A0J9YW53 1432 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 OVOS2Q6IE36 1432 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 SMG6Q86US8 1419 aaKnown RBP5.11□□□□□ -1.59
PTPRC-214ENST00000530727 PIK3C2AO00443 1686 aa5.11□□□□□ -1.59
PTPRC-214ENST00000530727 AATKQ6ZMQ8 1374 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 TTC21BQ7Z4L5 1316 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 B8ZZF3 427 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 H0Y858 1186 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 RFPL3O75679 317 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 GLRX3O76003 335 aaKnown RBP5.1□□□□□ -1.59
PTPRC-214ENST00000530727 FGAP02671 866 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 MMEP08473 750 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 SDSP20132 328 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 MC4RP32245 332 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 MTHFSP49914 203 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 NFATC3Q12968 1075 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 TMEM132BQ14DG7 1078 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 TM4SF20Q53R12 229 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 PIK3R6Q5UE93 754 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 SLC4A10Q6U841 1118 aa5.1□□□□□ -1.59
PTPRC-214ENST00000530727 DPP8Q6V1X1 898 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms