RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 MYBPC3Q14896 1274 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 ZNF174Q15697 407 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 CCDC144BQ3MJ40 725 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 NRN1LQ496H8 165 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 GORABQ5T7V8 394 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 PIK3R6Q5UE93 754 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 WDR78Q5VTH9 848 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 SLFN12LQ6IEE8 588 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 DDX46Q7L014 1031 aaKnown RBP4.72□□□□□ -1.65
CTR9-205ENST00000529898 CLEC14AQ86T13 490 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 ANKRD13AQ8IZ07 590 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 NME8Q8N427 588 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 ERCC4Q92889 916 aaPredicted RBP4.72□□□□□ -1.65
CTR9-205ENST00000529898 RNPC3Q96LT9 517 aaKnown RBP4.72□□□□□ -1.65
CTR9-205ENST00000529898 GPHA2Q96T91 129 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 UBA5Q9GZZ9 404 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 TLR9Q9NR96 1032 aa4.72□□□□□ -1.65
CTR9-205ENST00000529898 CGNQ9P2M7 1197 aaKnown RBP4.72□□□□□ -1.65
CTR9-205ENST00000529898 HECAQ9UBI9 543 aaPredicted RBP4.72□□□□□ -1.65
CTR9-205ENST00000529898 RAD54L2Q9Y4B4 1467 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 CCNB3Q8WWL7 1395 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 A0A0A6YYJ9 748 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 GOLGA6L6A8MZA4 724 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 NPIPB8E9PQR5 432 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 KRT37O76014 449 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 ASMTLO95671 621 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 JMJD7P0C870 316 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 SETSIPP0DME0 302 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 HIBADHP31937 336 aaKnown RBP4.71□□□□□ -1.66
CTR9-205ENST00000529898 TNNT3P45378 269 aaPredicted RBP4.71□□□□□ -1.66
CTR9-205ENST00000529898 KCNJ4P48050 445 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 TDO2P48775 406 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 GTF2A1P52655 376 aaPredicted RBP4.71□□□□□ -1.66
CTR9-205ENST00000529898 SARNPP82979 210 aaKnown RBP4.71□□□□□ -1.66
CTR9-205ENST00000529898 ATP2C1P98194 919 aaPredicted RBP4.71□□□□□ -1.66
CTR9-205ENST00000529898 PTH1RQ03431 593 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 IGFL4Q6B9Z1 124 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 ESRP1Q6NXG1 681 aaKnown RBP4.71□□□□□ -1.66
CTR9-205ENST00000529898 NOL8Q76FK4 1167 aaKnown RBP4.71□□□□□ -1.66
CTR9-205ENST00000529898 ZSCAN30Q86W11 494 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 TMPRSS6Q8IU80 811 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 C1orf210Q8IVY1 113 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 THEMISQ8N1K5 641 aaPredicted RBP4.71□□□□□ -1.66
CTR9-205ENST00000529898 PDCL2Q8N4E4 241 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 PPP1R14CQ8TAE6 165 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 ELF4Q99607 663 aaPredicted RBP4.71□□□□□ -1.66
CTR9-205ENST00000529898 MRIQ9BWK5 157 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 TEX13AQ9BXU3 409 aaPredicted RBP4.71□□□□□ -1.66
CTR9-205ENST00000529898 OSBPL6Q9BZF3 934 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 MTFR1LQ9H019 292 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 PCIF1Q9H4Z3 704 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 CEP72Q9P209 647 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 FAM184BQ9ULE4 1060 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 SYNPO2Q9UMS6 1093 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 HS3ST3A1Q9Y663 406 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 KDM5BQ9UGL1 1544 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 SYNRGQ9UMZ2 1314 aa4.71□□□□□ -1.66
CTR9-205ENST00000529898 RAB3GAP2Q9H2M9 1393 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 EXOC5O00471 708 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 MPHOSPH10O00566 681 aaKnown RBP4.7□□□□□ -1.66
CTR9-205ENST00000529898 CYP27B1O15528 508 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 PEX11BO96011 259 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 F2P00734 622 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 HMGA2P52926 109 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 HMGN5P82970 282 aaKnown RBP4.7□□□□□ -1.66
CTR9-205ENST00000529898 PURAQ00577 322 aaKnown RBP4.7□□□□□ -1.66
CTR9-205ENST00000529898 DSG1Q02413 1049 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 HHEXQ03014 270 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 KLF10Q13118 480 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 LRRC32Q14392 662 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 TCEA2Q15560 299 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 CFAP100Q494V2 611 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 CT47A1Q5JQC4 288 aaPredicted RBP4.7□□□□□ -1.66
CTR9-205ENST00000529898 GJC2Q5T442 439 aaPredicted RBP4.7□□□□□ -1.66
CTR9-205ENST00000529898 ICE2Q659A1 982 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 PHYKPLQ8IUZ5 450 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 ZFPM1Q8IX07 1006 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 ZZZ3Q8IYH5 903 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 D2HGDHQ8N465 521 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 PLA2G15Q8NCC3 412 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 PIF1Q9H611 641 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 OXSMQ9NWU1 459 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 SMC3Q9UQE7 1217 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 GIT1Q9Y2X7 761 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 GCC2Q8IWJ2 1684 aa4.7□□□□□ -1.66
CTR9-205ENST00000529898 LRRC9Q6ZRR7 1453 aa4.69□□□□□ -1.66
CTR9-205ENST00000529898 IBTKQ9P2D0 1353 aaPredicted RBP4.69□□□□□ -1.66
CTR9-205ENST00000529898 A0A1W2PRX2 142 aa4.69□□□□□ -1.66
CTR9-205ENST00000529898 MTSS1O43312 755 aa4.69□□□□□ -1.66
CTR9-205ENST00000529898 C1SP09871 688 aa4.69□□□□□ -1.66
CTR9-205ENST00000529898 VSIG10L2P0DP72 767 aa4.69□□□□□ -1.66
CTR9-205ENST00000529898 XRCC6P12956 609 aaKnown RBP eCLIP4.69□□□□□ -1.66
CTR9-205ENST00000529898 ATP2A2P16615 1042 aaKnown RBP4.69□□□□□ -1.66
CTR9-205ENST00000529898 SLC9A1P19634 815 aa4.69□□□□□ -1.66
CTR9-205ENST00000529898 SCP2P22307 547 aa4.69□□□□□ -1.66
CTR9-205ENST00000529898 TCIRG1Q13488 830 aa4.69□□□□□ -1.66
CTR9-205ENST00000529898 BECN1Q14457 450 aa4.69□□□□□ -1.66
CTR9-205ENST00000529898 LSM12Q3MHD2 195 aaKnown RBP4.69□□□□□ -1.66
CTR9-205ENST00000529898 FNDC7Q5VTL7 733 aa4.69□□□□□ -1.66
CTR9-205ENST00000529898 LRCH2Q5VUJ6 765 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms