RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 TCEAL9Q9UHQ7 104 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 CNTNAP5Q8WYK1 1306 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 EVPLQ92817 2033 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 A0A0U1RQF3 1178 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 TMEM150BA6NC51 233 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 MEIS1O00470 390 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 DHX15O43143 795 aaKnown RBP3.99□□□□□ -1.77
PTPRC-213ENST00000529828 CHMP2AO43633 222 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 GALTP07902 379 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 DARSP14868 501 aaKnown RBP3.99□□□□□ -1.77
PTPRC-213ENST00000529828 EIF4BP23588 611 aaKnown RBP3.99□□□□□ -1.77
PTPRC-213ENST00000529828 CLCN4P51793 760 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 AFF1P51825 1210 aaKnown RBP3.99□□□□□ -1.77
PTPRC-213ENST00000529828 ADCY7P51828 1080 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 AK2P54819 239 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 BMS1Q14692 1282 aaKnown RBP3.99□□□□□ -1.77
PTPRC-213ENST00000529828 UGCGQ16739 394 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 TWF2Q6IBS0 349 aaKnown RBP3.99□□□□□ -1.77
PTPRC-213ENST00000529828 ZNF280BQ86YH2 543 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 GLYCTKQ8IVS8 523 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 SMC5Q8IY18 1101 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 GJA10Q969M2 543 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 PKNOX2Q96KN3 472 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 LZTS2Q9BRK4 669 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 ZNF577Q9BSK1 485 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 ARHGEF3Q9NR81 526 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 DLL3Q9NYJ7 618 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 PIN4Q9Y237 131 aaKnown RBP3.99□□□□□ -1.77
PTPRC-213ENST00000529828 PRG3Q9Y2Y8 225 aaPredicted RBP3.99□□□□□ -1.77
PTPRC-213ENST00000529828 SAMM50Q9Y512 469 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 DENND4AQ7Z401 1863 aa3.99□□□□□ -1.77
PTPRC-213ENST00000529828 CLUHO75153 1309 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 CCDC195A0A1B0GUA6 201 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 DCDC2BA2VCK2 349 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 SMCO2A6NFE2 343 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 F8W810 466 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 IPO5O00410 1097 aaKnown RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 INPPL1O15357 1258 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 ZNF862O60290 1169 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 DDHD2O94830 711 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 CALM1P0DP23 149 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 CALM2P0DP24 149 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 CALM3P0DP25 149 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 SREBF1P36956 1147 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 PHKA2P46019 1235 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 GNAQP50148 359 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 PRKCEQ02156 737 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 TBC1D8BQ0IIM8 1120 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 NOMO2Q5JPE7 1267 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 GLB1LQ6UWU2 654 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 TREML4Q6UXN2 200 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 TAS1R1Q7RTX1 841 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 DDX53Q86TM3 631 aaKnown RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 C1orf210Q8IVY1 113 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 SLC44A3Q8N4M1 653 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 LINC01465Q8N7H1 131 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 SUMF1Q8NBK3 374 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 BBXQ8WY36 941 aaPredicted RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 B3GALT6Q96L58 329 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 TCEANC2Q96MN5 208 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 MAP3K14Q99558 947 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 EMILIN2Q9BXX0 1053 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 ADAM33Q9BZ11 813 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 RIC8AQ9NPQ8 531 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 DLGAP2Q9P1A6 1054 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 IGSF9Q9P2J2 1179 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 NCDNQ9UBB6 729 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 WNT16Q9UBV4 365 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 SIT1Q9Y3P8 196 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 MAFBQ9Y5Q3 323 aaPredicted RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 RBM8AQ9Y5S9 174 aaKnown RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 SLC12A7Q9Y666 1083 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 C2orf16Q68DN1 1984 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 CACNA1IQ9P0X4 2223 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 LAMA1P25391 3075 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 IGLV3-22A0A075B6J6 115 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 A0A087WZ62 844 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 TEX28O15482 410 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 KINO60870 393 aaKnown RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 POMCP01189 267 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 OATP04181 439 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 URODP06132 367 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 PSAPP07602 524 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 SRFP11831 508 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 CD72P21854 359 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 CHMLP26374 656 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 TMOD1P28289 359 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 SMARCA1P28370 1054 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 GGCXP38435 758 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 POLGP54098 1239 aaPredicted RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 ATXN1P54253 815 aaKnown RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 CSTF1Q05048 431 aaKnown RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 LPAL2Q16609 132 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 MTERF2Q49AM1 385 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 PRR16Q569H4 304 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 TTC22Q5TAA0 569 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 DCLRE1AQ6PJP8 1040 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 ZC3H14Q6PJT7 736 aaKnown RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 TSSK4Q6SA08 328 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 PPFIBP1Q86W92 1011 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms