RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 SLC9A7Q96T83 725 aa27.41■■□□□ 1.98
LTBP3-213ENST00000529371 CCDC113Q9H0I3 377 aa27.41■■□□□ 1.98
LTBP3-213ENST00000529371 TSPYL2Q9H2G4 693 aaPredicted RBP27.41■■□□□ 1.98
LTBP3-213ENST00000529371 FZD8Q9H461 694 aa27.41■■□□□ 1.98
LTBP3-213ENST00000529371 MRPL44Q9H9J2 332 aaKnown RBP27.41■■□□□ 1.98
LTBP3-213ENST00000529371 RNF216Q9NWF9 866 aaPredicted RBP27.41■■□□□ 1.98
LTBP3-213ENST00000529371 CXXC1Q9P0U4 656 aaPredicted RBP27.41■■□□□ 1.98
LTBP3-213ENST00000529371 FRMD3A2A2Y4 597 aa27.4■■□□□ 1.98
LTBP3-213ENST00000529371 MAPTP10636 758 aaKnown RBP27.4■■□□□ 1.98
LTBP3-213ENST00000529371 IBSPP21815 317 aaPredicted RBP27.4■■□□□ 1.98
LTBP3-213ENST00000529371 NOTUMQ6P988 496 aa27.4■■□□□ 1.98
LTBP3-213ENST00000529371 HAUS6Q7Z4H7 955 aa27.4■■□□□ 1.98
LTBP3-213ENST00000529371 MYOCDQ8IZQ8 938 aa27.4■■□□□ 1.98
LTBP3-213ENST00000529371 TMEM161BQ8NDZ6 487 aa27.4■■□□□ 1.98
LTBP3-213ENST00000529371 PVALEFA0A1B0GWK0 134 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 RBAK-RBAKDNI3L0D1 243 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 ACKR2O00590 384 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 ENPP3O14638 875 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 CASP1P29466 404 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 DSC3Q14574 896 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 POSTNQ15063 836 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 RASIP1Q5U651 963 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 STXBP4Q6ZWJ1 553 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 CCDC51Q96ER9 411 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 OLFML3Q9NRN5 406 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 RGS18Q9NS28 235 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 EXOC1Q9NV70 894 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 TBC1D7Q9P0N9 293 aa27.39■■□□□ 1.98
LTBP3-213ENST00000529371 CNTNAP2Q9UHC6 1331 aa27.39■■□□□ 1.97
LTBP3-213ENST00000529371 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.38■■□□□ 1.97
LTBP3-213ENST00000529371 MGEA5O60502 916 aa27.38■■□□□ 1.97
LTBP3-213ENST00000529371 ATP2A2P16615 1042 aaKnown RBP27.38■■□□□ 1.97
LTBP3-213ENST00000529371 NMT1P30419 496 aaKnown RBP27.38■■□□□ 1.97
LTBP3-213ENST00000529371 ALCAMQ13740 583 aa27.38■■□□□ 1.97
LTBP3-213ENST00000529371 AMHR2Q16671 573 aa27.38■■□□□ 1.97
LTBP3-213ENST00000529371 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.38■■□□□ 1.97
LTBP3-213ENST00000529371 SLC24A5Q71RS6 500 aa27.38■■□□□ 1.97
LTBP3-213ENST00000529371 PHOSPHO2Q8TCD6 241 aa27.38■■□□□ 1.97
LTBP3-213ENST00000529371 LINC01599Q8WXQ3 324 aa27.38■■□□□ 1.97
LTBP3-213ENST00000529371 BICD1Q96G01 975 aa27.38■■□□□ 1.97
LTBP3-213ENST00000529371 CPB2Q96IY4 423 aa27.38■■□□□ 1.97
LTBP3-213ENST00000529371 MRPL4Q9BYD3 311 aaKnown RBP27.38■■□□□ 1.97
LTBP3-213ENST00000529371 LRFN2Q9ULH4 789 aa27.38■■□□□ 1.97
LTBP3-213ENST00000529371 N4BP3O15049 544 aa27.37■■□□□ 1.97
LTBP3-213ENST00000529371 B4GALT5O43286 388 aa27.37■■□□□ 1.97
LTBP3-213ENST00000529371 GCNT3O95395 438 aa27.37■■□□□ 1.97
LTBP3-213ENST00000529371 STAG3L1P0CL83 205 aa27.37■■□□□ 1.97
LTBP3-213ENST00000529371 SKIP12755 728 aa27.37■■□□□ 1.97
LTBP3-213ENST00000529371 ARF4P18085 180 aaPredicted RBP27.37■■□□□ 1.97
LTBP3-213ENST00000529371 SARSP49591 514 aaKnown RBP27.37■■□□□ 1.97
LTBP3-213ENST00000529371 RAB27AP51159 221 aa27.37■■□□□ 1.97
LTBP3-213ENST00000529371 DEFB103AP81534 67 aa27.37■■□□□ 1.97
LTBP3-213ENST00000529371 APBB1IPQ7Z5R6 666 aaPredicted RBP27.37■■□□□ 1.97
LTBP3-213ENST00000529371 ADPGKQ9BRR6 497 aa27.37■■□□□ 1.97
LTBP3-213ENST00000529371 FAM26FQ5R3K3 315 aa27.36■■□□□ 1.97
LTBP3-213ENST00000529371 RTN4RL1Q86UN2 441 aaPredicted RBP27.36■■□□□ 1.97
LTBP3-213ENST00000529371 HVCN1Q96D96 273 aa27.36■■□□□ 1.97
LTBP3-213ENST00000529371 TRIM6Q9C030 488 aaPredicted RBP27.36■■□□□ 1.97
LTBP3-213ENST00000529371 LMBRD1Q9NUN5 540 aa27.36■■□□□ 1.97
LTBP3-213ENST00000529371 PRR29P0C7W0 189 aa27.35■■□□□ 1.97
LTBP3-213ENST00000529371 HOXA11P31270 313 aaPredicted RBP27.35■■□□□ 1.97
LTBP3-213ENST00000529371 ZNF720Q7Z2F6 126 aa27.35■■□□□ 1.97
LTBP3-213ENST00000529371 NPAS4Q8IUM7 802 aa27.35■■□□□ 1.97
LTBP3-213ENST00000529371 FIZ1Q96SL8 496 aa27.35■■□□□ 1.97
LTBP3-213ENST00000529371 ZBED2Q9BTP6 218 aa27.35■■□□□ 1.97
LTBP3-213ENST00000529371 ST6GALNAC4Q9H4F1 302 aa27.35■■□□□ 1.97
LTBP3-213ENST00000529371 TBX20Q9UMR3 447 aa27.35■■□□□ 1.97
LTBP3-213ENST00000529371 PCDHB7Q9Y5E2 793 aa27.35■■□□□ 1.97
LTBP3-213ENST00000529371 PCDHB13Q9Y5F0 798 aa27.35■■□□□ 1.97
LTBP3-213ENST00000529371 C9IYK1 514 aa27.34■■□□□ 1.97
LTBP3-213ENST00000529371 UPP2O95045 317 aa27.34■■□□□ 1.97
LTBP3-213ENST00000529371 SMC2O95347 1197 aa27.34■■□□□ 1.97
LTBP3-213ENST00000529371 RPN1P04843 607 aaKnown RBP27.34■■□□□ 1.97
LTBP3-213ENST00000529371 GTF2BQ00403 316 aa27.34■■□□□ 1.97
LTBP3-213ENST00000529371 DPYDQ12882 1025 aa27.34■■□□□ 1.97
LTBP3-213ENST00000529371 ATF7IP2Q5U623 682 aa27.34■■□□□ 1.97
LTBP3-213ENST00000529371 TAS1R3Q7RTX0 852 aa27.34■■□□□ 1.97
LTBP3-213ENST00000529371 HACE1Q8IYU2 909 aa27.34■■□□□ 1.97
LTBP3-213ENST00000529371 KCNN1Q92952 543 aa27.34■■□□□ 1.97
LTBP3-213ENST00000529371 FAM105AQ9NUU6 356 aa27.34■■□□□ 1.97
LTBP3-213ENST00000529371 EXOC7Q9UPT5 735 aa27.34■■□□□ 1.97
LTBP3-213ENST00000529371 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.33■■□□□ 1.97
LTBP3-213ENST00000529371 A0A1B0GUA9 196 aa27.33■■□□□ 1.97
LTBP3-213ENST00000529371 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.33■■□□□ 1.97
LTBP3-213ENST00000529371 LIG4P49917 911 aa27.33■■□□□ 1.97
LTBP3-213ENST00000529371 PNOCQ13519 176 aa27.33■■□□□ 1.97
LTBP3-213ENST00000529371 KMT5BQ4FZB7 885 aa27.33■■□□□ 1.97
LTBP3-213ENST00000529371 FAM117BQ6P1L5 589 aa27.33■■□□□ 1.97
LTBP3-213ENST00000529371 SLC27A1Q6PCB7 646 aa27.33■■□□□ 1.97
LTBP3-213ENST00000529371 ECHDC2Q86YB7 292 aa27.33■■□□□ 1.97
LTBP3-213ENST00000529371 HERC6Q8IVU3 1022 aa27.33■■□□□ 1.97
LTBP3-213ENST00000529371 RNF169Q8NCN4 708 aa27.33■■□□□ 1.97
LTBP3-213ENST00000529371 TARS2Q9BW92 718 aaKnown RBP27.33■■□□□ 1.97
LTBP3-213ENST00000529371 TRAIPQ9BWF2 469 aa27.33■■□□□ 1.97
LTBP3-213ENST00000529371 A0A0U1RQF3 1178 aa27.32■■□□□ 1.96
LTBP3-213ENST00000529371 HNRNPDLO14979 420 aaKnown RBP27.32■■□□□ 1.96
LTBP3-213ENST00000529371 MATR3P43243 847 aaKnown RBP eCLIP27.32■■□□□ 1.96
LTBP3-213ENST00000529371 ZC2HC1CQ53FD0 456 aaPredicted RBP27.32■■□□□ 1.96
LTBP3-213ENST00000529371 NT5DC1Q5TFE4 455 aa27.32■■□□□ 1.96
LTBP3-213ENST00000529371 CDR2LQ86X02 465 aaPredicted RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms