RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 KRT2P35908 639 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 SLC11A1P49279 550 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 ANAPC15P60006 121 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 NCBP1Q09161 790 aaKnown RBP17.44■□□□□ 0.38
CTSB-215ENST00000528965 TFDP1Q14186 410 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 MXD4Q14582 209 aaPredicted RBP17.44■□□□□ 0.38
CTSB-215ENST00000528965 XKR9Q5GH70 373 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 ATAT1Q5SQI0 421 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 RARS2Q5T160 578 aaKnown RBP17.44■□□□□ 0.38
CTSB-215ENST00000528965 KIAA1841Q6NSI8 718 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 CABP7Q86V35 215 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 HAS1Q92839 578 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 CCDC51Q96ER9 411 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 MTRQ99707 1265 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 TMEM175Q9BSA9 504 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 EMILIN2Q9BXX0 1053 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 POMKQ9H5K3 350 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 ORC3Q9UBD5 711 aaPredicted RBP17.44■□□□□ 0.38
CTSB-215ENST00000528965 TPCN1Q9ULQ1 816 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 SORCS3Q9UPU3 1222 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 ZDBF2Q9HCK1 2354 aa17.44■□□□□ 0.38
CTSB-215ENST00000528965 MEIS3P2A8K0S8 358 aa17.43■□□□□ 0.38
CTSB-215ENST00000528965 MRPL10Q7Z7H8 261 aaKnown RBP17.43■□□□□ 0.38
CTSB-215ENST00000528965 RNF149Q8NC42 400 aa17.43■□□□□ 0.38
CTSB-215ENST00000528965 AUTS2Q8WXX7 1259 aa17.43■□□□□ 0.38
CTSB-215ENST00000528965 ASIC4Q96FT7 647 aa17.43■□□□□ 0.38
CTSB-215ENST00000528965 IRF2BPLQ9H1B7 796 aa17.43■□□□□ 0.38
CTSB-215ENST00000528965 SFXN1Q9H9B4 322 aa17.43■□□□□ 0.38
CTSB-215ENST00000528965 BMP2KQ9NSY1 1161 aaPredicted RBP17.43■□□□□ 0.38
CTSB-215ENST00000528965 WRAP73Q9P2S5 460 aaPredicted RBP17.43■□□□□ 0.38
CTSB-215ENST00000528965 DNAJB4Q9UDY4 337 aa17.43■□□□□ 0.38
CTSB-215ENST00000528965 DBR1Q9UK59 544 aaKnown RBP17.43■□□□□ 0.38
CTSB-215ENST00000528965 C2CD4DB7Z1M9 353 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 AXLP30530 894 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 CYP4A11Q02928 519 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 PTPN14Q15678 1187 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 NOTUMQ6P988 496 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 ELMSAN1Q6PJG2 1045 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 AGMOQ6ZNB7 445 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 FERMT3Q86UX7 667 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 HACE1Q8IYU2 909 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 PLCD3Q8N3E9 789 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 KREMEN2Q8NCW0 462 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 PRSS33Q8NF86 280 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 OXER1Q8TDS5 423 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 BCL7CQ8WUZ0 217 aaPredicted RBP17.42■□□□□ 0.38
CTSB-215ENST00000528965 DYDC2Q96IM9 177 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 RGL1Q9NZL6 768 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 SSX2IPQ9Y2D8 614 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 FAN1Q9Y2M0 1017 aa17.42■□□□□ 0.38
CTSB-215ENST00000528965 EIF5BO60841 1220 aaKnown RBP17.41■□□□□ 0.38
CTSB-215ENST00000528965 ALDH2P05091 517 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 URODP06132 367 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 ITGA4P13612 1032 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 EPCAMP16422 314 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 NCLP19338 710 aaKnown RBP17.41■□□□□ 0.38
CTSB-215ENST00000528965 NUBP1P53384 320 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 SPIRE1Q08AE8 756 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 TRIM29Q14134 588 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 CTTNQ14247 550 aaKnown RBP17.41■□□□□ 0.38
CTSB-215ENST00000528965 CALCRLQ16602 461 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 ZNF280BQ86YH2 543 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 TPH2Q8IWU9 490 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 ZNF579Q8NAF0 562 aaKnown RBP17.41■□□□□ 0.38
CTSB-215ENST00000528965 MINDY3Q9H8M7 445 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 MRPL17Q9NRX2 175 aaKnown RBP17.41■□□□□ 0.38
CTSB-215ENST00000528965 CDH22Q9UJ99 828 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 USTQ9Y2C2 406 aa17.41■□□□□ 0.38
CTSB-215ENST00000528965 INO80B-WBP1J3KQ70 363 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 NR1I2O75469 434 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 DGAT1O75907 488 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 LYPLA2O95372 231 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 KLRC2P26717 231 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 HOXA11P31270 313 aaPredicted RBP17.4■□□□□ 0.38
CTSB-215ENST00000528965 AK2P54819 239 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 PTENP60484 403 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 UBXN11Q5T124 520 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 CCDC149Q6ZUS6 474 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 ZDHHC14Q8IZN3 488 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 C12orf76Q8N812 135 aaPredicted RBP17.4■□□□□ 0.38
CTSB-215ENST00000528965 SLC22A17Q8WUG5 538 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 ACSF2Q96CM8 615 aaPredicted RBP17.4■□□□□ 0.38
CTSB-215ENST00000528965 TRIM6Q9C030 488 aaPredicted RBP17.4■□□□□ 0.38
CTSB-215ENST00000528965 GJB4Q9NTQ9 266 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 DPP7Q9UHL4 492 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 PCDHA12Q9UN75 941 aa17.4■□□□□ 0.38
CTSB-215ENST00000528965 TSPAN1O60635 241 aa17.39■□□□□ 0.37
CTSB-215ENST00000528965 CTDNEP1O95476 244 aa17.39■□□□□ 0.37
CTSB-215ENST00000528965 POMCP01189 267 aa17.39■□□□□ 0.37
CTSB-215ENST00000528965 SSBP05455 408 aaKnown RBP eCLIP17.39■□□□□ 0.37
CTSB-215ENST00000528965 WEE2P0C1S8 567 aa17.39■□□□□ 0.37
CTSB-215ENST00000528965 AVPR2P30518 371 aa17.39■□□□□ 0.37
CTSB-215ENST00000528965 POU5F1BQ06416 359 aa17.39■□□□□ 0.37
CTSB-215ENST00000528965 NR5A1Q13285 461 aa17.39■□□□□ 0.37
CTSB-215ENST00000528965 IER5LQ5T953 404 aa17.39■□□□□ 0.37
CTSB-215ENST00000528965 OTOP3Q7RTS5 596 aa17.39■□□□□ 0.37
CTSB-215ENST00000528965 GTF3C6Q969F1 213 aa17.39■□□□□ 0.37
CTSB-215ENST00000528965 EIF2AK1Q9BQI3 630 aaKnown RBP17.39■□□□□ 0.37
CTSB-215ENST00000528965 HERC2P3Q9BVR0 1158 aa17.39■□□□□ 0.37
CTSB-215ENST00000528965 VN1R3Q9BXE9 311 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms