RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 GJB2P29033 226 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 HOXA11P31270 313 aaPredicted RBP10.65□□□□□ -0.7
CHD7-208ENST00000528280 CCT6AP40227 531 aaKnown RBP10.65□□□□□ -0.7
CHD7-208ENST00000528280 RNASELQ05823 741 aaKnown RBP10.65□□□□□ -0.7
CHD7-208ENST00000528280 HYAL1Q12794 435 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 CAMK1Q14012 370 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 GIT2Q14161 759 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 PPP2R5AQ15172 486 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 NOMO2Q5JPE7 1267 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 CLLU1OSQ5K130 101 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 KRT79Q5XKE5 535 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 LARP1BQ659C4 914 aaKnown RBP10.65□□□□□ -0.7
CHD7-208ENST00000528280 PTCRAQ6ISU1 281 aaPredicted RBP10.65□□□□□ -0.7
CHD7-208ENST00000528280 LRRC55Q6ZSA7 311 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 ZBTB8OSQ8IWT0 167 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 FAM178BQ8IXR5 827 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 GJD3Q8N144 294 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 EFHBQ8N7U6 833 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.65□□□□□ -0.7
CHD7-208ENST00000528280 HELQQ8TDG4 1101 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 PRIMPOLQ96LW4 560 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 FAM193BQ96PV7 902 aaPredicted RBP10.65□□□□□ -0.7
CHD7-208ENST00000528280 IGFLR1Q9H665 355 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 RNF19AQ9NV58 838 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 PRKAG3Q9UGI9 489 aa10.65□□□□□ -0.7
CHD7-208ENST00000528280 COL4A4P53420 1690 aaPredicted RBP10.64□□□□□ -0.71
CHD7-208ENST00000528280 SLC26A4O43511 780 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 MED24O75448 989 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 NR1I2O75469 434 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 OFD1O75665 1012 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 BMP15O95972 392 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 ITGA4P13612 1032 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 DNAJB1P25685 340 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 TOB1P50616 345 aaPredicted RBP10.64□□□□□ -0.71
CHD7-208ENST00000528280 EFNA5P52803 228 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 BCAR1P56945 870 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 ARL6IP4Q66PJ3 421 aaKnown RBP10.64□□□□□ -0.71
CHD7-208ENST00000528280 PADI6Q6TGC4 694 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 TMC7Q7Z402 723 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 IGSF22Q8N9C0 903 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 TMEM87AQ8NBN3 555 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 KIFAP3Q92845 792 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 TMEM169Q96HH4 297 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 IFT74Q96LB3 600 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 PHOX2BQ99453 314 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 TRIM6Q9C030 488 aaPredicted RBP10.64□□□□□ -0.71
CHD7-208ENST00000528280 CSRNP2Q9H175 543 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 XPNPEP1Q9NQW7 623 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 TSHZ2Q9NRE2 1034 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 PRMT7Q9NVM4 692 aaPredicted RBP10.64□□□□□ -0.71
CHD7-208ENST00000528280 PCDHB6Q9Y5E3 794 aa10.64□□□□□ -0.71
CHD7-208ENST00000528280 FNDC1Q4ZHG4 1894 aaPredicted RBP10.64□□□□□ -0.71
CHD7-208ENST00000528280 PHLPP2Q6ZVD8 1323 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 A0A1B0GUA9 196 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 RBAK-RBAKDNI3L0D1 243 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 USO1O60763 962 aaKnown RBP10.63□□□□□ -0.71
CHD7-208ENST00000528280 ATF7P17544 494 aaPredicted RBP10.63□□□□□ -0.71
CHD7-208ENST00000528280 GLRA2P23416 452 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 NAMPTP43490 491 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 NRIP1P48552 1158 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 NDUFV1P49821 464 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 CAPSQ13938 189 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 SMC1AQ14683 1233 aaKnown RBP10.63□□□□□ -0.71
CHD7-208ENST00000528280 MAPK6Q16659 721 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 FAM187BQ17R55 369 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 PPP4R3CPQ6ZMV5 832 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 APBB1IPQ7Z5R6 666 aaPredicted RBP10.63□□□□□ -0.71
CHD7-208ENST00000528280 SLC39A11Q8N1S5 342 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 MRPL43Q8N983 215 aaKnown RBP10.63□□□□□ -0.71
CHD7-208ENST00000528280 POP1Q99575 1024 aaKnown RBP10.63□□□□□ -0.71
CHD7-208ENST00000528280 TCF25Q9BQ70 676 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 TMEM175Q9BSA9 504 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 TIPINQ9BVW5 301 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 NT5C3AQ9H0P0 336 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 POLR3FQ9H1D9 316 aaPredicted RBP10.63□□□□□ -0.71
CHD7-208ENST00000528280 MINDY3Q9H8M7 445 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 RSAD1Q9HA92 442 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 C17orf75Q9HAS0 396 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 ENTPD7Q9NQZ7 604 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.63□□□□□ -0.71
CHD7-208ENST00000528280 BMP2KQ9NSY1 1161 aaPredicted RBP10.63□□□□□ -0.71
CHD7-208ENST00000528280 CD207Q9UJ71 328 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 KIAA1024Q9UPX6 916 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 SSX2IPQ9Y2D8 614 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 FAN1Q9Y2M0 1017 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 GIT1Q9Y2X7 761 aa10.63□□□□□ -0.71
CHD7-208ENST00000528280 LRRIQ4A6NIV6 560 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 H3BQ06 376 aaPredicted RBP10.62□□□□□ -0.71
CHD7-208ENST00000528280 FSCN2O14926 492 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 TSPAN1O60635 241 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 EYA4O95677 639 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 CXCL14O95715 111 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 GALTP07902 379 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 HOXB8P17481 243 aaPredicted RBP10.62□□□□□ -0.71
CHD7-208ENST00000528280 IRS1P35568 1242 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 LTBRP36941 435 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 ERVFC1P60507 584 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 MBTD1Q05BQ5 628 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 COASYQ13057 564 aa10.62□□□□□ -0.71
CHD7-208ENST00000528280 DUSP6Q16828 381 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms