RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 ATAT1Q5SQI0 421 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 RARS2Q5T160 578 aaKnown RBP4.68□□□□□ -1.66
CHD7-205ENST00000527825 XP32Q5T750 250 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 ZKSCAN2Q63HK3 967 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 SYCE2Q6PIF2 218 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 TMED8Q6PL24 325 aaPredicted RBP4.68□□□□□ -1.66
CHD7-205ENST00000527825 TMEM184AQ6ZMB5 413 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 OTOP3Q7RTS5 596 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 RAB44Q7Z6P3 723 aaPredicted RBP4.68□□□□□ -1.66
CHD7-205ENST00000527825 FAM160B2Q86V87 743 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 TREML1Q86YW5 311 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 LURAP1LQ8IV03 231 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 THNSL1Q8IYQ7 743 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 CMTR2Q8IYT2 770 aaKnown RBP4.68□□□□□ -1.66
CHD7-205ENST00000527825 VN1R2Q8NFZ6 395 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 MORC4Q8TE76 937 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 SDR42E1Q8WUS8 393 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 PIBF1Q8WXW3 757 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 ZCCHC14Q8WYQ9 949 aaKnown RBP4.68□□□□□ -1.66
CHD7-205ENST00000527825 ANKRD7Q92527 254 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 ATP6V0A1Q93050 837 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 WNT8BQ93098 351 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 GPR20Q99678 358 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 BCO2Q9BYV7 579 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 EPC1Q9H2F5 836 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 ADAM7Q9H2U9 754 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 TMEM260Q9NX78 707 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 WNT16Q9UBV4 365 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 CLIP2Q9UDT6 1046 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 PUF60Q9UHX1 559 aaKnown RBP4.68□□□□□ -1.66
CHD7-205ENST00000527825 FBXO4Q9UKT5 387 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 CCPG1Q9ULG6 757 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 TNNQ9UQP3 1299 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 USTQ9Y2C2 406 aa4.68□□□□□ -1.66
CHD7-205ENST00000527825 SHROOM3Q8TF72 1996 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 DOCK5Q9H7D0 1870 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 C17orf102A2RUQ5 167 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 ADARB2-AS1A8MUL3 147 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 TMEM232C9JQI7 657 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 OPLAHO14841 1288 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 CAND2O75155 1236 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 DGKIO75912 1065 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 EOMESO95936 686 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 MBD3O95983 291 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 WEE2P0C1S8 567 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 LINC00271P0C7V0 271 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 ZNF286BP0CG31 522 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 SPATA31C1P0DKV0 1188 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 ARP10275 920 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 EPB42P16452 691 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 IBSPP21815 317 aaPredicted RBP4.67□□□□□ -1.66
CHD7-205ENST00000527825 ARSDP51689 593 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 FAM193AP78312 1265 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 GABPB1Q06547 395 aaPredicted RBP4.67□□□□□ -1.66
CHD7-205ENST00000527825 OS9Q13438 667 aaPredicted RBP4.67□□□□□ -1.66
CHD7-205ENST00000527825 BAATQ14032 418 aaPredicted RBP4.67□□□□□ -1.66
CHD7-205ENST00000527825 BMS1Q14692 1282 aaKnown RBP4.67□□□□□ -1.66
CHD7-205ENST00000527825 RABEP1Q15276 862 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 UVSSAQ2YD98 709 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 AASDHQ4L235 1098 aaPredicted RBP4.67□□□□□ -1.66
CHD7-205ENST00000527825 MUM1L1Q5H9M0 696 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 LAIR1Q6GTX8 287 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 KIAA1841Q6NSI8 718 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 SERINC5Q86VE9 423 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 CREBRFQ8IUR6 639 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 ETFBKMTQ8IXQ9 262 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 RPAP2Q8IXW5 612 aaPredicted RBP4.67□□□□□ -1.66
CHD7-205ENST00000527825 IPO4Q8TEX9 1081 aaKnown RBP4.67□□□□□ -1.66
CHD7-205ENST00000527825 KAT2BQ92831 832 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 ZNF689Q96CS4 500 aaPredicted RBP4.67□□□□□ -1.66
CHD7-205ENST00000527825 MKNK2Q9HBH9 465 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 PARD6AQ9NPB6 346 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 DCP1AQ9NPI6 582 aaPredicted RBP4.67□□□□□ -1.66
CHD7-205ENST00000527825 ZBTB40Q9NUA8 1239 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 TMEM51Q9NW97 253 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 ZSCAN32Q9NX65 697 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 NYAP2Q9P242 653 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 IGSF9Q9P2J2 1179 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 SEPT3Q9UH03 358 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 CDH22Q9UJ99 828 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 TICRRQ7Z2Z1 1910 aa4.67□□□□□ -1.66
CHD7-205ENST00000527825 RBAK-RBAKDNI3L0D1 243 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 M0R082 166 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 TNFRSF10BO14763 440 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 CTIFO43310 598 aaKnown RBP4.66□□□□□ -1.66
CHD7-205ENST00000527825 NARSO43776 548 aaKnown RBP4.66□□□□□ -1.66
CHD7-205ENST00000527825 LRP3O75074 770 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 FGF18O76093 207 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 GNAT1P11488 350 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 TRIM27P14373 513 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 GRNP28799 593 aaKnown RBP4.66□□□□□ -1.66
CHD7-205ENST00000527825 SCNN1AP37088 669 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 ERVFC1P60507 584 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 CCINQ13939 588 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 LPAL2Q16609 132 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 LY6KQ17RY6 165 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 FAM26DQ5JW98 314 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 SLFN13Q68D06 897 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 PHLDB3Q6NSJ2 640 aa4.66□□□□□ -1.66
CHD7-205ENST00000527825 PRR23CQ6ZRP0 262 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms