RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 CCT6AP40227 531 aaKnown RBP21.4■■□□□ 1.02
CAPN1-211ENST00000527739 CAPSQ13938 189 aa21.4■■□□□ 1.02
CAPN1-211ENST00000527739 SLC39A11Q8N1S5 342 aa21.4■■□□□ 1.02
CAPN1-211ENST00000527739 URGCPQ8TCY9 931 aa21.4■■□□□ 1.02
CAPN1-211ENST00000527739 NGRNQ9NPE2 291 aaKnown RBP21.4■■□□□ 1.02
CAPN1-211ENST00000527739 GPRC5CQ9NQ84 441 aa21.4■■□□□ 1.02
CAPN1-211ENST00000527739 TBC1D13Q9NVG8 400 aa21.4■■□□□ 1.02
CAPN1-211ENST00000527739 LRWD1Q9UFC0 647 aa21.4■■□□□ 1.02
CAPN1-211ENST00000527739 BARX2Q9UMQ3 279 aaPredicted RBP21.4■■□□□ 1.02
CAPN1-211ENST00000527739 KIAA1671Q9BY89 1806 aa21.39■■□□□ 1.02
CAPN1-211ENST00000527739 ARHGEF35A5YM69 484 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 LRRIQ4A6NIV6 560 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 H3BQV1 296 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 FSCN2O14926 492 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 DCXO43602 365 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 TSPAN1O60635 241 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 GLRA2P23416 452 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 RPA1P27694 616 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 UBXN11Q5T124 520 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 ADHFE1Q8IWW8 467 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 TMEM169Q96HH4 297 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 FAM193BQ96PV7 902 aaPredicted RBP21.39■■□□□ 1.01
CAPN1-211ENST00000527739 RSAD1Q9HA92 442 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 DBR1Q9UK59 544 aaKnown RBP21.39■■□□□ 1.01
CAPN1-211ENST00000527739 PCDHB6Q9Y5E3 794 aa21.39■■□□□ 1.01
CAPN1-211ENST00000527739 MBTPS2O43462 519 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 CD2BP2O95400 341 aaKnown RBP21.38■■□□□ 1.01
CAPN1-211ENST00000527739 ITGA4P13612 1032 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 GJB2P29033 226 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 AXLP30530 894 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 RBM10P98175 930 aaKnown RBP21.38■■□□□ 1.01
CAPN1-211ENST00000527739 POU5F1BQ06416 359 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 PTGDRQ13258 359 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 SMAD4Q13485 552 aaKnown RBP21.38■■□□□ 1.01
CAPN1-211ENST00000527739 BMS1Q14692 1282 aaKnown RBP21.38■■□□□ 1.01
CAPN1-211ENST00000527739 HAUS3Q68CZ6 603 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 LLGL2Q6P1M3 1020 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 NOTUMQ6P988 496 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 AGMOQ6ZNB7 445 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 MRPL10Q7Z7H8 261 aaKnown RBP21.38■■□□□ 1.01
CAPN1-211ENST00000527739 TMEM87AQ8NBN3 555 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 MCPH1Q8NEM0 835 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 RSPH1Q8WYR4 309 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 CDCA3Q99618 268 aaPredicted RBP21.38■■□□□ 1.01
CAPN1-211ENST00000527739 APOL6Q9BWW8 343 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 EIF2AQ9BY44 585 aaKnown RBP21.38■■□□□ 1.01
CAPN1-211ENST00000527739 TRIM6Q9C030 488 aaPredicted RBP21.38■■□□□ 1.01
CAPN1-211ENST00000527739 NRDE2Q9H7Z3 1164 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 CLEC1BQ9P126 229 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 PRKAG3Q9UGI9 489 aa21.38■■□□□ 1.01
CAPN1-211ENST00000527739 FNDC1Q4ZHG4 1894 aaPredicted RBP21.38■■□□□ 1.01
CAPN1-211ENST00000527739 HIDE1A8MVS5 230 aa21.37■■□□□ 1.01
CAPN1-211ENST00000527739 POMCP01189 267 aa21.37■■□□□ 1.01
CAPN1-211ENST00000527739 TOB1P50616 345 aaPredicted RBP21.37■■□□□ 1.01
CAPN1-211ENST00000527739 MBTD1Q05BQ5 628 aa21.37■■□□□ 1.01
CAPN1-211ENST00000527739 PCBP1Q15365 356 aaKnown RBP eCLIP21.37■■□□□ 1.01
CAPN1-211ENST00000527739 SMAD2Q15796 467 aaKnown RBP21.37■■□□□ 1.01
CAPN1-211ENST00000527739 DUSP6Q16828 381 aa21.37■■□□□ 1.01
CAPN1-211ENST00000527739 TMEM132AQ24JP5 1023 aa21.37■■□□□ 1.01
CAPN1-211ENST00000527739 PADI6Q6TGC4 694 aa21.37■■□□□ 1.01
CAPN1-211ENST00000527739 ZNF280BQ86YH2 543 aa21.37■■□□□ 1.01
CAPN1-211ENST00000527739 C4orf32Q8N8J7 132 aa21.37■■□□□ 1.01
CAPN1-211ENST00000527739 CNNM3Q8NE01 707 aa21.37■■□□□ 1.01
CAPN1-211ENST00000527739 RAB34Q9BZG1 259 aa21.37■■□□□ 1.01
CAPN1-211ENST00000527739 SMC3Q9UQE7 1217 aa21.37■■□□□ 1.01
CAPN1-211ENST00000527739 CNTNAP2Q9UHC6 1331 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 MUC6Q6W4X9 2439 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 CXCL14O95715 111 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 GLP2RO95838 553 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 GALTP07902 379 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 SRGAP2BP0DMP2 458 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 LIG1P18858 919 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 NCLP19338 710 aaKnown RBP21.36■■□□□ 1.01
CAPN1-211ENST00000527739 MCM2P49736 904 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 FXR2P51116 673 aaKnown RBP eCLIP21.36■■□□□ 1.01
CAPN1-211ENST00000527739 SMC1AQ14683 1233 aaKnown RBP21.36■■□□□ 1.01
CAPN1-211ENST00000527739 IFNLR1Q8IU57 520 aaPredicted RBP21.36■■□□□ 1.01
CAPN1-211ENST00000527739 VPS52Q8N1B4 723 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 MSLNLQ96KJ4 702 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 CSRNP2Q9H175 543 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 UBN1Q9NPG3 1134 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 KANSL3Q9P2N6 904 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 DNAJB4Q9UDY4 337 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 KIAA1024Q9UPX6 916 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 HES2Q9Y543 173 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 IPPQ9Y573 584 aa21.36■■□□□ 1.01
CAPN1-211ENST00000527739 B4GALT5O43286 388 aa21.35■■□□□ 1.01
CAPN1-211ENST00000527739 ARF4P18085 180 aaPredicted RBP21.35■■□□□ 1.01
CAPN1-211ENST00000527739 SLC11A1P49279 550 aa21.35■■□□□ 1.01
CAPN1-211ENST00000527739 AFF1P51825 1210 aaKnown RBP21.35■■□□□ 1.01
CAPN1-211ENST00000527739 PDIA5Q14554 519 aa21.35■■□□□ 1.01
CAPN1-211ENST00000527739 CDR2LQ86X02 465 aaPredicted RBP21.35■■□□□ 1.01
CAPN1-211ENST00000527739 ZBTB8OSQ8IWT0 167 aa21.35■■□□□ 1.01
CAPN1-211ENST00000527739 SMG8Q8ND04 991 aaKnown RBP21.35■■□□□ 1.01
CAPN1-211ENST00000527739 SNX29Q8TEQ0 813 aa21.35■■□□□ 1.01
CAPN1-211ENST00000527739 CCDC51Q96ER9 411 aa21.35■■□□□ 1.01
CAPN1-211ENST00000527739 TBC1D32Q96NH3 1257 aa21.35■■□□□ 1.01
CAPN1-211ENST00000527739 RNF39Q9H2S5 420 aa21.35■■□□□ 1.01
CAPN1-211ENST00000527739 POLD4Q9HCU8 107 aa21.35■■□□□ 1.01
CAPN1-211ENST00000527739 FSD2A1L4K1 749 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms