RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 NCBP1Q09161 790 aaKnown RBP24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 TRIM29Q14134 588 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 CALCRLQ16602 461 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 ME3Q16798 604 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 BMP8AQ7Z5Y6 402 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 FERMT3Q86UX7 667 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 ZNF280BQ86YH2 543 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 SUGP1Q8IWZ8 645 aaKnown RBP24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 CCDC43Q96MW1 224 aaKnown RBP24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 ZBP1Q9H171 429 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 RSAD1Q9HA92 442 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 PPP4R2Q9NY27 417 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 KANSL3Q9P2N6 904 aa24.96■■□□□ 1.59
TRAPPC4-208ENST00000527680 SLITRK3O94933 977 aa24.95■■□□□ 1.58
TRAPPC4-208ENST00000527680 CTSAP10619 480 aa24.95■■□□□ 1.58
TRAPPC4-208ENST00000527680 SLC11A1P49279 550 aa24.95■■□□□ 1.58
TRAPPC4-208ENST00000527680 AGMOQ6ZNB7 445 aa24.95■■□□□ 1.58
TRAPPC4-208ENST00000527680 MRPL10Q7Z7H8 261 aaKnown RBP24.95■■□□□ 1.58
TRAPPC4-208ENST00000527680 NECTIN4Q96NY8 510 aa24.95■■□□□ 1.58
TRAPPC4-208ENST00000527680 EIF2AK1Q9BQI3 630 aaKnown RBP24.95■■□□□ 1.58
TRAPPC4-208ENST00000527680 CDH22Q9UJ99 828 aa24.95■■□□□ 1.58
TRAPPC4-208ENST00000527680 FAN1Q9Y2M0 1017 aa24.95■■□□□ 1.58
TRAPPC4-208ENST00000527680 TRIOO75962 3097 aa24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 SPDYE4A6NLX3 237 aa24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 HOXA11P31270 313 aaPredicted RBP24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 TXKP42681 527 aa24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 NEK4P51957 841 aa24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 SPIRE1Q08AE8 756 aa24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 SIGLEC14Q08ET2 396 aa24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 MXD4Q14582 209 aaPredicted RBP24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 RARS2Q5T160 578 aaKnown RBP24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 C12orf76Q8N812 135 aaPredicted RBP24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 GTF3C6Q969F1 213 aa24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 RIPOR3Q96MK2 946 aa24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 TTC12Q9H892 705 aaPredicted RBP24.94■■□□□ 1.58
TRAPPC4-208ENST00000527680 BTBD18B2RXH4 712 aa24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 DDHD2O94830 711 aa24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 POMCP01189 267 aa24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 SSBP05455 408 aaKnown RBP eCLIP24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 WEE2P0C1S8 567 aa24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 ITGA4P13612 1032 aa24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 MTHFRP42898 656 aa24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 TFDP1Q14186 410 aa24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 PTPN21Q16825 1174 aa24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 ATAT1Q5SQI0 421 aa24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 CNNM3Q8NE01 707 aa24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 BCL7CQ8WUZ0 217 aaPredicted RBP24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 IRAK3Q9Y616 596 aa24.93■■□□□ 1.58
TRAPPC4-208ENST00000527680 CNTNAP2Q9UHC6 1331 aa24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 INO80B-WBP1J3KQ70 363 aa24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 LARGE1O95461 756 aa24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 EPCAMP16422 314 aa24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 AFF1P51825 1210 aaKnown RBP24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 NHLH1Q02575 133 aa24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 UBXN11Q5T124 520 aa24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 TNFRSF25Q93038 417 aa24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 POMKQ9H5K3 350 aa24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 UBN1Q9NPG3 1134 aa24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 DZANK1Q9NVP4 752 aa24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 MYO10Q9HD67 2058 aa24.92■■□□□ 1.58
TRAPPC4-208ENST00000527680 NCLP19338 710 aaKnown RBP24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 ATP2B1P20020 1258 aa24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 KLRC2P26717 231 aa24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 KANK3Q6NY19 840 aa24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 CABP7Q86V35 215 aa24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 PPFIBP1Q86W92 1011 aa24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 DIS3L2Q8IYB7 885 aaKnown RBP24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 NSUN7Q8NE18 718 aaKnown RBP24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 CPB2Q96IY4 423 aa24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 HSD17B14Q9BPX1 270 aa24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 EMILIN2Q9BXX0 1053 aa24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 ANKEF1Q9NU02 776 aa24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 STK39Q9UEW8 545 aa24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 DBR1Q9UK59 544 aaKnown RBP24.91■■□□□ 1.58
TRAPPC4-208ENST00000527680 NEMFO60524 1076 aa24.9■■□□□ 1.58
TRAPPC4-208ENST00000527680 JAK2O60674 1132 aa24.9■■□□□ 1.58
TRAPPC4-208ENST00000527680 EIF5BO60841 1220 aaKnown RBP24.9■■□□□ 1.58
TRAPPC4-208ENST00000527680 AXLP30530 894 aa24.9■■□□□ 1.58
TRAPPC4-208ENST00000527680 PTENP60484 403 aa24.9■■□□□ 1.58
TRAPPC4-208ENST00000527680 PCBP1Q15365 356 aaKnown RBP eCLIP24.9■■□□□ 1.58
TRAPPC4-208ENST00000527680 NOTUMQ6P988 496 aa24.9■■□□□ 1.58
TRAPPC4-208ENST00000527680 FBXL6Q8N531 539 aa24.9■■□□□ 1.58
TRAPPC4-208ENST00000527680 TMEM175Q9BSA9 504 aa24.9■■□□□ 1.58
TRAPPC4-208ENST00000527680 TRIM6Q9C030 488 aaPredicted RBP24.9■■□□□ 1.58
TRAPPC4-208ENST00000527680 XPNPEP1Q9NQW7 623 aa24.9■■□□□ 1.58
TRAPPC4-208ENST00000527680 A0A087WWV3 80 aa24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 NRP1O14786 923 aa24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 B4GALT3O60512 393 aa24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 DGAT1O75907 488 aa24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 KREMEN2Q8NCW0 462 aa24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 SMG8Q8ND04 991 aaKnown RBP24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 PIGOQ8TEQ8 1089 aa24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 SLC22A17Q8WUG5 538 aa24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 APOL6Q9BWW8 343 aa24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 EIF2AQ9BY44 585 aaKnown RBP24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 MRPL17Q9NRX2 175 aaKnown RBP24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 IPPQ9Y573 584 aa24.89■■□□□ 1.58
TRAPPC4-208ENST00000527680 ZNF318Q5VUA4 2279 aa24.88■■□□□ 1.57
TRAPPC4-208ENST00000527680 C2CD4DB7Z1M9 353 aa24.88■■□□□ 1.57
TRAPPC4-208ENST00000527680 TSPAN1O60635 241 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms