RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 WDR44Q5JSH3 913 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 TANGO2Q6ICL3 276 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 PDXDC1Q6P996 788 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 TOGARAM2Q6ZUX3 1019 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 CYP2U1Q7Z449 544 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 ECHDC2Q86YB7 292 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 PALB2Q86YC2 1186 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 TMEM40Q8WWA1 233 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 CAMK1GQ96NX5 476 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 RPS6KC1Q96S38 1066 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 NUSAP1Q9BXS6 441 aaKnown RBP8.07□□□□□ -1.12
VPS26B-204ENST00000527586 ZNF287Q9HBT7 754 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 POLMQ9NP87 494 aaPredicted RBP8.07□□□□□ -1.12
VPS26B-204ENST00000527586 MBD1Q9UIS9 605 aaPredicted RBP8.07□□□□□ -1.12
VPS26B-204ENST00000527586 STX8Q9UNK0 236 aa8.07□□□□□ -1.12
VPS26B-204ENST00000527586 AHCTF1Q8WYP5 2266 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 CARNS1A5YM72 827 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 URODP06132 367 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 HSPD1P10809 573 aaKnown RBP8.06□□□□□ -1.12
VPS26B-204ENST00000527586 GBP1P32455 592 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 ZNF76P36508 570 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 CXADRP78310 365 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 TFAP4Q01664 338 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 SEMA3FQ13275 785 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 OS9Q13438 667 aaPredicted RBP8.06□□□□□ -1.12
VPS26B-204ENST00000527586 DGKKQ5KSL6 1271 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 HIST2H2BCQ6DN03 193 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 TMPRSS7Q7RTY8 843 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 MCF2L2Q86YR7 1114 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 NPAS3Q8IXF0 933 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 NME8Q8N427 588 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 ING5Q8WYH8 240 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 PIGKQ92643 395 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 IRF7Q92985 503 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 PDCD2LQ9BRP1 358 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 MAF1Q9H063 256 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 NRDE2Q9H7Z3 1164 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 ZNF334Q9HCZ1 680 aaPredicted RBP8.06□□□□□ -1.12
VPS26B-204ENST00000527586 STK39Q9UEW8 545 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 SEPT9Q9UHD8 586 aaPredicted RBP8.06□□□□□ -1.12
VPS26B-204ENST00000527586 EVLQ9UI08 416 aaPredicted RBP8.06□□□□□ -1.12
VPS26B-204ENST00000527586 APOBEC2Q9Y235 224 aaKnown RBP8.06□□□□□ -1.12
VPS26B-204ENST00000527586 PCDHB9Q9Y5E1 797 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 PLIN4Q96Q06 1357 aa8.06□□□□□ -1.12
VPS26B-204ENST00000527586 PNMA6EA0A0J9YXQ4 647 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 RRN3P2A6NIE6 340 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 RRP8O43159 456 aaKnown RBP8.05□□□□□ -1.12
VPS26B-204ENST00000527586 TGM5O43548 720 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 ZMYND10O75800 440 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 MYF5P13349 255 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 SLC11A1P49279 550 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 RHDQ02161 417 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 NEDD9Q14511 834 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 KARSQ15046 597 aaKnown RBP8.05□□□□□ -1.12
VPS26B-204ENST00000527586 SLCO6A1Q86UG4 719 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 VSIG10LQ86VR7 867 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 FAM228AQ86W67 206 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 WDR63Q8IWG1 891 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 ELSPBP1Q96BH3 223 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 EAF2Q96CJ1 260 aaPredicted RBP8.05□□□□□ -1.12
VPS26B-204ENST00000527586 MCRS1Q96EZ8 462 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 TRMT61BQ9BVS5 477 aaKnown RBP8.05□□□□□ -1.12
VPS26B-204ENST00000527586 SLC8A2Q9UPR5 921 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 SSX2IPQ9Y2D8 614 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 PCDHA2Q9Y5H9 948 aa8.05□□□□□ -1.12
VPS26B-204ENST00000527586 HEMK1Q9Y5R4 338 aaPredicted RBP8.05□□□□□ -1.12
VPS26B-204ENST00000527586 GOLIM4O00461 696 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 TERTO14746 1132 aaKnown RBP8.04□□□□□ -1.12
VPS26B-204ENST00000527586 SH3BP5O60239 455 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 OPHN1O60890 802 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 CD59P13987 128 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 INSRRP14616 1297 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 GDI1P31150 447 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 ADD2P35612 726 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 TCF7P36402 384 aaPredicted RBP8.04□□□□□ -1.12
VPS26B-204ENST00000527586 ATXN3P54252 364 aaPredicted RBP8.04□□□□□ -1.12
VPS26B-204ENST00000527586 RNASELQ05823 741 aaKnown RBP8.04□□□□□ -1.12
VPS26B-204ENST00000527586 CAMK2BQ13554 666 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 MAPK6Q16659 721 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 PPP4R3BQ5MIZ7 849 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 TAS1R1Q7RTX1 841 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 MAP4K3Q8IVH8 894 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 PDCD7Q8N8D1 485 aaKnown RBP8.04□□□□□ -1.12
VPS26B-204ENST00000527586 IL31RAQ8NI17 732 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 DNAJC2Q99543 621 aaKnown RBP8.04□□□□□ -1.12
VPS26B-204ENST00000527586 KIF2CQ99661 725 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 GTPBP2Q9BX10 602 aaKnown RBP8.04□□□□□ -1.12
VPS26B-204ENST00000527586 GBP3Q9H0R5 595 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 RXFP1Q9HBX9 757 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 TRPV5Q9NQA5 729 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 ERAP1Q9NZ08 941 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 DNAJB4Q9UDY4 337 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 POLIQ9UNA4 740 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 PCDHA1Q9Y5I3 950 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 ITPR2Q14571 2701 aa8.04□□□□□ -1.12
VPS26B-204ENST00000527586 ABCB11O95342 1321 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 FRMPD4Q14CM0 1322 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 SMIM35A0A1B0GVV1 85 aa8.03□□□□□ -1.12
VPS26B-204ENST00000527586 TLX3O43711 291 aaPredicted RBP8.03□□□□□ -1.12
VPS26B-204ENST00000527586 NMT2O60551 498 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms