RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 HOXC8P31273 242 aa20.58■□□□□ 0.88
SMPD1-203ENST00000527275 CAPSQ13938 189 aa20.58■□□□□ 0.88
SMPD1-203ENST00000527275 MXD4Q14582 209 aaPredicted RBP20.58■□□□□ 0.88
SMPD1-203ENST00000527275 PTPN14Q15678 1187 aa20.58■□□□□ 0.88
SMPD1-203ENST00000527275 CNGA4Q8IV77 575 aa20.58■□□□□ 0.88
SMPD1-203ENST00000527275 NOC4LQ9BVI4 516 aaKnown RBP20.58■□□□□ 0.88
SMPD1-203ENST00000527275 PCDHB13Q9Y5F0 798 aa20.58■□□□□ 0.88
SMPD1-203ENST00000527275 C17orf102A2RUQ5 167 aa20.57■□□□□ 0.88
SMPD1-203ENST00000527275 LRRIQ4A6NIV6 560 aa20.57■□□□□ 0.88
SMPD1-203ENST00000527275 EIF3DO15371 548 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMPD1-203ENST00000527275 NAMPTP43490 491 aa20.57■□□□□ 0.88
SMPD1-203ENST00000527275 FXR1P51114 621 aaKnown RBP eCLIP20.57■□□□□ 0.88
SMPD1-203ENST00000527275 PPP2R5AQ15172 486 aa20.57■□□□□ 0.88
SMPD1-203ENST00000527275 ZCWPW2Q504Y3 356 aa20.57■□□□□ 0.88
SMPD1-203ENST00000527275 FAM47CQ5HY64 1035 aa20.57■□□□□ 0.88
SMPD1-203ENST00000527275 KIAA0319LQ8IZA0 1049 aa20.57■□□□□ 0.88
SMPD1-203ENST00000527275 ZNF668Q96K58 619 aaPredicted RBP20.57■□□□□ 0.88
SMPD1-203ENST00000527275 GLT1D1Q96MS3 346 aa20.57■□□□□ 0.88
SMPD1-203ENST00000527275 ST6GALNAC4Q9H4F1 302 aa20.57■□□□□ 0.88
SMPD1-203ENST00000527275 GTF2IRD1Q9UHL9 959 aa20.57■□□□□ 0.88
SMPD1-203ENST00000527275 CABYRO75952 493 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 SRGAP2CP0DJJ0 459 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 GTF2BQ00403 316 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 FKBP3Q00688 224 aaKnown RBP20.56■□□□□ 0.88
SMPD1-203ENST00000527275 KNOP1Q1ED39 458 aaKnown RBP20.56■□□□□ 0.88
SMPD1-203ENST00000527275 BMT2Q1RMZ1 405 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 LRRC55Q6ZSA7 311 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 NYAP1Q6ZVC0 841 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 STXBP4Q6ZWJ1 553 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 RNF149Q8NC42 400 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 ARMC5Q96C12 935 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 CCDC51Q96ER9 411 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 IKZF4Q9H2S9 585 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 KCTD10Q9H3F6 313 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 KIAA0100Q14667 2235 aaKnown RBP20.56■□□□□ 0.88
SMPD1-203ENST00000527275 DENND3A2RUS2 1198 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 CCP110O43303 1012 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 VTNP04004 478 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 GNAT1P11488 350 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 MIIPQ5JXC2 388 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 SLC17A8Q8NDX2 589 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 PPP1R13BQ96KQ4 1090 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 FAM49AQ9H0Q0 323 aaPredicted RBP20.56■□□□□ 0.88
SMPD1-203ENST00000527275 ARHGAP28Q9P2N2 729 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 KCNG1Q9UIX4 513 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 OGDHLQ9ULD0 1010 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 AKT3Q9Y243 479 aa20.56■□□□□ 0.88
SMPD1-203ENST00000527275 CYP2C9P11712 490 aa20.55■□□□□ 0.88
SMPD1-203ENST00000527275 ITGA7Q13683 1181 aa20.55■□□□□ 0.88
SMPD1-203ENST00000527275 GDF6Q6KF10 455 aaPredicted RBP20.55■□□□□ 0.88
SMPD1-203ENST00000527275 RUFY4Q6ZNE9 571 aa20.55■□□□□ 0.88
SMPD1-203ENST00000527275 PRIMPOLQ96LW4 560 aa20.55■□□□□ 0.88
SMPD1-203ENST00000527275 NLRP4Q96MN2 994 aa20.55■□□□□ 0.88
SMPD1-203ENST00000527275 NAA15Q9BXJ9 866 aaKnown RBP20.55■□□□□ 0.88
SMPD1-203ENST00000527275 A0A1W2PQ45 241 aaPredicted RBP20.55■□□□□ 0.88
SMPD1-203ENST00000527275 A0A1W2PQY0 241 aa20.55■□□□□ 0.88
SMPD1-203ENST00000527275 KBTBD13C9JR72 458 aa20.55■□□□□ 0.88
SMPD1-203ENST00000527275 DNM1LO00429 736 aa20.55■□□□□ 0.88
SMPD1-203ENST00000527275 DEPTORQ8TB45 409 aa20.55■□□□□ 0.88
SMPD1-203ENST00000527275 MAP7D2Q96T17 732 aa20.55■□□□□ 0.88
SMPD1-203ENST00000527275 PPP1R16BQ96T49 567 aa20.55■□□□□ 0.88
SMPD1-203ENST00000527275 RNF225M0QZC1 329 aaPredicted RBP20.54■□□□□ 0.88
SMPD1-203ENST00000527275 ALCAMQ13740 583 aa20.54■□□□□ 0.88
SMPD1-203ENST00000527275 SESTD1Q86VW0 696 aa20.54■□□□□ 0.88
SMPD1-203ENST00000527275 TBX20Q9UMR3 447 aa20.54■□□□□ 0.88
SMPD1-203ENST00000527275 SMIM35A0A1B0GVV1 85 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 ASAP2O43150 1006 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 VWA3BQ502W6 1294 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 U2AF1L4Q8WU68 220 aaKnown RBP20.53■□□□□ 0.88
SMPD1-203ENST00000527275 DNAJB3Q8WWF6 145 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 STARD7Q9NQZ5 370 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 PHF24Q9UPV7 400 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 ZMYM2Q9UBW7 1377 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 TGFB1I1O43294 461 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 ZSCAN12O43309 604 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 TMEM62Q0P6H9 643 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 MAN2A1Q16706 1144 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 FKBP15Q5T1M5 1219 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 TAS1R3Q7RTX0 852 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 CEP63Q96MT8 703 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 IFT122Q9HBG6 1241 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 UBE4BO95155 1302 aa20.53■□□□□ 0.88
SMPD1-203ENST00000527275 SGPL1O95470 568 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 KRT9P35527 623 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 NLRP11P59045 1033 aaKnown RBP20.52■□□□□ 0.88
SMPD1-203ENST00000527275 TFDP1Q14186 410 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 PPP4R3CPQ6ZMV5 832 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 SYCP3Q8IZU3 236 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 NDST4Q9H3R1 872 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 ABHD10Q9NUJ1 306 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 TTC26A0AVF1 554 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 H0YCG3 227 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 K7ERI5 159 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 SYCP1Q15431 976 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 ACCSQ96QU6 501 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 ERGIC2Q96RQ1 377 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 NUP58Q9BVL2 599 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 CRISPLD2Q9H0B8 497 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 GBP3Q9H0R5 595 aa20.52■□□□□ 0.88
SMPD1-203ENST00000527275 TMEM206Q9H813 350 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms