RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 DBR1Q9UK59 544 aaKnown RBP11.61□□□□□ -0.55
PRPF40B-204ENST00000527253 INPP5FQ9Y2H2 1132 aa11.61□□□□□ -0.55
PRPF40B-204ENST00000527253 PCDHB6Q9Y5E3 794 aa11.61□□□□□ -0.55
PRPF40B-204ENST00000527253 PI4K2BG5E9Z4 385 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 B4GALT5O43286 388 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 DDHD2O94830 711 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 GALTP07902 379 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 NCLP19338 710 aaKnown RBP11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 RPA1P27694 616 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 PPM1AP35813 382 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 TRAPPC10P48553 1259 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 SLC11A1P49279 550 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 POU5F1BQ06416 359 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 SMAD4Q13485 552 aaKnown RBP11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 PDE12Q6L8Q7 609 aaKnown RBP11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 GLB1LQ6UWU2 654 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 BSNDQ8WZ55 320 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 PPP2R3CQ969Q6 453 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 PGBD4Q96DM1 585 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 NACC1Q96RE7 527 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 MRPL9Q9BYD2 267 aaKnown RBP11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 POLD4Q9HCU8 107 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 MIOSQ9NXC5 875 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 PUF60Q9UHX1 559 aaKnown RBP11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 HES2Q9Y543 173 aa11.6□□□□□ -0.55
PRPF40B-204ENST00000527253 C2orf71A6NGG8 1288 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 TTLL13PA6NNM8 815 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 INO80B-WBP1J3KQ70 363 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 ZC3H11AO75152 810 aaKnown RBP eCLIP11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 ARF4P18085 180 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 SSTR3P32745 418 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 FXR2P51116 673 aaKnown RBP eCLIP11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 KRT17Q04695 432 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 PTGDRQ13258 359 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 GNL2Q13823 731 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 TFDP1Q14186 410 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 PADI6Q6TGC4 694 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 TMEM184AQ6ZMB5 413 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 TMC7Q7Z402 723 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 CDR2LQ86X02 465 aaPredicted RBP11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 ADHFE1Q8IWW8 467 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 MRPL43Q8N983 215 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 SMRP1Q8NCR6 262 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 AUTS2Q8WXX7 1259 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 IGSF21Q96ID5 467 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 TBC1D32Q96NH3 1257 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 NFKBIZQ9BYH8 718 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 GBP3Q9H0R5 595 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 CSRNP2Q9H175 543 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 S1PR5Q9H228 398 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 RSAD1Q9HA92 442 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 NGRNQ9NPE2 291 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 ENTPD7Q9NQZ7 604 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 PRKAG3Q9UGI9 489 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 IPPQ9Y573 584 aa11.59□□□□□ -0.55
PRPF40B-204ENST00000527253 FAM86C2PA6NEL3 165 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 PP2D1A8MPX8 630 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 ST18O60284 1047 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 CLASP2O75122 1294 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 ERLIN2O94905 339 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 POMCP01189 267 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 EDN1P05305 212 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 ITGA4P13612 1032 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 CYP11B2P19099 503 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 COL9A1P20849 921 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 ALDH7A1P49419 539 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 LLGL2Q6P1M3 1020 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 SYCE2Q6PIF2 218 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 VPS52Q8N1B4 723 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 ERMNQ8TAM6 284 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 CDCA3Q99618 268 aaPredicted RBP11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 ZBP1Q9H171 429 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 FZD8Q9H461 694 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 NOL7Q9UMY1 257 aaKnown RBP11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 USP20Q9Y2K6 914 aa11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 USP15Q9Y4E8 981 aaPredicted RBP11.58□□□□□ -0.56
PRPF40B-204ENST00000527253 A0A1B0GUA9 196 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 INPPL1O15357 1258 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 CXCL14O95715 111 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 GJB2P29033 226 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 CDC25AP30304 524 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 AXLP30530 894 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 CCT6AP40227 531 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 RNASELQ05823 741 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 PDIA5Q14554 519 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 SMC1AQ14683 1233 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 PCBP1Q15365 356 aaKnown RBP eCLIP11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 CDCA2Q69YH5 1023 aaPredicted RBP11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 ANKRD54Q6NXT1 300 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 NOTUMQ6P988 496 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 PPP4R3CPQ6ZMV5 832 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 DDX53Q86TM3 631 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 COLGALT2Q8IYK4 626 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 IGSF22Q8N9C0 903 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 GSTCDQ8NEC7 633 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 MCPH1Q8NEM0 835 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 FEZF2Q8TBJ5 459 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 RSPH1Q8WYR4 309 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 SUSD6Q92537 303 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms