RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 VCPKMTQ9H867 229 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC01001-201ENST00000526704 UBE2TQ9NPD8 197 aaPredicted RBP12.59□□□□□ -0.39
LINC01001-201ENST00000526704 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.59□□□□□ -0.39
LINC01001-201ENST00000526704 TMX2Q9Y320 296 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 IPO5O00410 1097 aaKnown RBP12.59□□□□□ -0.39
LINC01001-201ENST00000526704 BACH1O14867 736 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 CAND2O75155 1236 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 MMP10P09238 476 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 NUDT17P0C025 328 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 BCRP11274 1271 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 KRT13P13646 458 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 EIF3BP55884 814 aaKnown RBP12.59□□□□□ -0.39
LINC01001-201ENST00000526704 IFFO1Q0D2I5 559 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 BYSLQ13895 437 aaKnown RBP12.59□□□□□ -0.39
LINC01001-201ENST00000526704 PCIF1Q9H4Z3 704 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 EHMT1Q9H9B1 1298 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 GOPCQ9HD26 462 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 GRHL1Q9NZI5 618 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 CTTNBP2NLQ9P2B4 639 aa12.59□□□□□ -0.39
LINC01001-201ENST00000526704 GOLGB1Q14789 3259 aaKnown RBP12.59□□□□□ -0.39
LINC01001-201ENST00000526704 PFASO15067 1338 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 DDX39AO00148 427 aaKnown RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 FTLP02792 175 aaPredicted RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 ACTN3Q08043 901 aaPredicted RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 CLUL1Q15846 466 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 PADI6Q6TGC4 694 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 INTS8Q75QN2 995 aaKnown RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 RPUSD2Q8IZ73 545 aaKnown RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 ZDHHC14Q8IZN3 488 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 PRELID2Q8N945 189 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 ZSWIM2Q8NEG5 633 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 ZSWIM1Q9BR11 485 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 CBWD1Q9BRT8 395 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 SNX24Q9Y343 169 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 ARID2Q68CP9 1835 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 TMEM110-MUSTN1A8MSY1 372 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 MIF4GDA9UHW6 222 aaKnown RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 GCLMP48507 274 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 VAMP7P51809 220 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 PMS2P54278 862 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 PLTPP55058 493 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 AOC3Q16853 763 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 ZNF746Q6NUN9 644 aaPredicted RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 MAEAQ7L5Y9 396 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 FBXO25Q8TCJ0 367 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 PLEKHO2Q8TD55 490 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 TATDN2Q93075 761 aa12.58□□□□□ -0.4
LINC01001-201ENST00000526704 RNF25Q96BH1 459 aaPredicted RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 ZNF219Q9P2Y4 722 aaPredicted RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 HERC5Q9UII4 1024 aaKnown RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 MRPL11Q9Y3B7 192 aaKnown RBP12.58□□□□□ -0.4
LINC01001-201ENST00000526704 RPTORQ8N122 1335 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 ATMINO43313 823 aaPredicted RBP12.57□□□□□ -0.4
LINC01001-201ENST00000526704 CHRNB2P17787 502 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 CTNNA2P26232 953 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 DRG2P55039 364 aaKnown RBP12.57□□□□□ -0.4
LINC01001-201ENST00000526704 UBAP2Q5T6F2 1119 aaKnown RBP12.57□□□□□ -0.4
LINC01001-201ENST00000526704 TTC27Q6P3X3 843 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 HOOK3Q86VS8 718 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 CCDC13Q8IYE1 715 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 UBL4BQ8N7F7 174 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 NEK9Q8TD19 979 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 TMEM174Q8WUU8 243 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 KAT5Q92993 513 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 PCDHB18PQ96TA0 734 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 PABPC3Q9H361 631 aaKnown RBP12.57□□□□□ -0.4
LINC01001-201ENST00000526704 CNOT10Q9H9A5 744 aaKnown RBP12.57□□□□□ -0.4
LINC01001-201ENST00000526704 CHORDC1Q9UHD1 332 aaPredicted RBP12.57□□□□□ -0.4
LINC01001-201ENST00000526704 RASAL2Q9UJF2 1139 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 PNMA2Q9UL42 364 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 ZBTB21Q9ULJ3 1066 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 H0YHG0 523 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 P4HA2O15460 535 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 CHRNA3P32297 505 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 RPL21P46778 160 aaKnown RBP12.57□□□□□ -0.4
LINC01001-201ENST00000526704 PEX5P50542 639 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 GPC5P78333 572 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 DRP2Q13474 957 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 PLCB4Q15147 1175 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 SPRED3Q2MJR0 410 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 GRIPAP1Q4V328 841 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 C12orf56Q8IXR9 622 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 MDM1Q8TC05 714 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 SEC16BQ96JE7 1060 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 RIT2Q99578 217 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 MXRA8Q9BRK3 442 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 PKD2L1Q9P0L9 805 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 PCYOX1Q9UHG3 505 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 NOCTQ9UK39 431 aaKnown RBP12.57□□□□□ -0.4
LINC01001-201ENST00000526704 TRPC5Q9UL62 973 aaPredicted RBP12.57□□□□□ -0.4
LINC01001-201ENST00000526704 PCDHA3Q9Y5H8 950 aa12.57□□□□□ -0.4
LINC01001-201ENST00000526704 TCP10L2B9ZVM9 353 aa12.56□□□□□ -0.4
LINC01001-201ENST00000526704 RTN2O75298 545 aa12.56□□□□□ -0.4
LINC01001-201ENST00000526704 MTA2O94776 668 aa12.56□□□□□ -0.4
LINC01001-201ENST00000526704 SGPL1O95470 568 aa12.56□□□□□ -0.4
LINC01001-201ENST00000526704 ALAS1P13196 640 aa12.56□□□□□ -0.4
LINC01001-201ENST00000526704 HSPA6P17066 643 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms