RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 CEP131Q9UPN4 1083 aa6.5□□□□□ -1.37
SF3B2-205ENST00000526653 DIS3Q9Y2L1 958 aaKnown RBP6.5□□□□□ -1.37
SF3B2-205ENST00000526653 CORINQ9Y5Q5 1042 aa6.5□□□□□ -1.37
SF3B2-205ENST00000526653 SMCHD1A6NHR9 2005 aa6.5□□□□□ -1.37
SF3B2-205ENST00000526653 GRIN2DO15399 1336 aa6.5□□□□□ -1.37
SF3B2-205ENST00000526653 FLT1P17948 1338 aa6.5□□□□□ -1.37
SF3B2-205ENST00000526653 RIF1Q5UIP0 2472 aaKnown RBP6.49□□□□□ -1.37
SF3B2-205ENST00000526653 SLC25A27O95847 323 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 KRT1P04264 644 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 ACTN1P12814 892 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 RAC2P15153 192 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 CFPP27918 469 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 CST5P28325 142 aaPredicted RBP6.49□□□□□ -1.37
SF3B2-205ENST00000526653 HK2P52789 917 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 DAB2P98082 770 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 MVPQ14764 893 aaKnown RBP6.49□□□□□ -1.37
SF3B2-205ENST00000526653 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 ADGRA1Q86SQ6 560 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 C1QL4Q86Z23 238 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 FBXO15Q8NCQ5 510 aaPredicted RBP6.49□□□□□ -1.37
SF3B2-205ENST00000526653 PHC3Q8NDX5 983 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 PHOSPHO2Q8TCD6 241 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 ADAMTS10Q9H324 1103 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 SERPINB13Q9UIV8 391 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 CHD8Q9HCK8 2581 aa6.49□□□□□ -1.37
SF3B2-205ENST00000526653 EPG5Q9HCE0 2579 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 UPK3BL1B0FP48 263 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 UPK3BL2E5RIL1 263 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 H0Y858 1186 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 CTAGE5O15320 804 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 CTSHP09668 335 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 C1QTNF9P0C862 333 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 PTGS1P23219 599 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 TPP2P29144 1249 aaPredicted RBP6.48□□□□□ -1.37
SF3B2-205ENST00000526653 ID4P47928 161 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 ST13P50502 369 aaKnown RBP6.48□□□□□ -1.37
SF3B2-205ENST00000526653 PLCD1P51178 756 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 PSMD2Q13200 908 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 GAB4Q2WGN9 574 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 BNC2Q6ZN30 1099 aaPredicted RBP6.48□□□□□ -1.37
SF3B2-205ENST00000526653 SND1Q7KZF4 910 aaKnown RBP eCLIP6.48□□□□□ -1.37
SF3B2-205ENST00000526653 ERMP1Q7Z2K6 904 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 RIOX2Q8IUF8 465 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 SLC43A3Q8NBI5 491 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 EDAQ92838 391 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 KCNK12Q9HB15 430 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 TLR9Q9NR96 1032 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 TRMT13Q9NUP7 481 aaKnown RBP6.48□□□□□ -1.37
SF3B2-205ENST00000526653 FBXO28Q9NVF7 368 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 A0A1B0GUL6 1792 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 LOC285556D6RIA3 1793 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 IL16Q14005 1332 aa6.48□□□□□ -1.37
SF3B2-205ENST00000526653 PDS5AQ29RF7 1337 aaKnown RBP6.48□□□□□ -1.37
SF3B2-205ENST00000526653 BRWD1Q9NSI6 2320 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.47□□□□□ -1.37
SF3B2-205ENST00000526653 TMEM221A6NGB7 291 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 M0R296 226 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 HPXP02790 462 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 SRFP11831 508 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 PLCG1P19174 1290 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 SHMT1P34896 483 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 TNFAIP2Q03169 654 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 CLUL1Q15846 466 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 ASCL5Q7RTU5 278 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 SIAH1Q8IUQ4 282 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 ADHFE1Q8IWW8 467 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 SUGP1Q8IWZ8 645 aaKnown RBP6.47□□□□□ -1.37
SF3B2-205ENST00000526653 LRRC56Q8IYG6 542 aaPredicted RBP6.47□□□□□ -1.37
SF3B2-205ENST00000526653 MIGA1Q8NAN2 632 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 FAM13CQ8NE31 585 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 NEK9Q8TD19 979 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 CYB5D2Q8WUJ1 264 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 CRBNQ96SW2 442 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 SLC9A7Q96T83 725 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 PRRX2Q99811 253 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 AP5M1Q9H0R1 490 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 UPF3AQ9H1J1 476 aaKnown RBP6.47□□□□□ -1.37
SF3B2-205ENST00000526653 TRIT1Q9H3H1 467 aaKnown RBP6.47□□□□□ -1.37
SF3B2-205ENST00000526653 ABHD16BQ9H3Z7 469 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 GPATCH2Q9NW75 528 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 RIPK3Q9Y572 518 aa6.47□□□□□ -1.37
SF3B2-205ENST00000526653 DOCK2Q92608 1830 aa6.46□□□□□ -1.37
SF3B2-205ENST00000526653 FAM221AA4D161 298 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 VWA5AO00534 786 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 CILPO75339 1184 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 CABYRO75952 493 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 PFKMP08237 780 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 SUPT20HL2P0C7V6 817 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 TRHRP34981 398 aaPredicted RBP6.46□□□□□ -1.38
SF3B2-205ENST00000526653 MCAMP43121 646 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 KCNJ6P48051 423 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 ERVK-21P61565 698 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 CACNA1BQ00975 2339 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 FSCN1Q16658 493 aaKnown RBP6.46□□□□□ -1.38
SF3B2-205ENST00000526653 HERC4Q5GLZ8 1057 aaPredicted RBP6.46□□□□□ -1.38
SF3B2-205ENST00000526653 TMEM63BQ5T3F8 832 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 MAMDC4Q6UXC1 1216 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 BMP8AQ7Z5Y6 402 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 MSL3Q8N5Y2 521 aaKnown RBP6.46□□□□□ -1.38
SF3B2-205ENST00000526653 DTWD2Q8NBA8 298 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms