RNA–Protein interactions for RNA: ENST00000526645.5

CTSB-212, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-212ENST00000526645 CCDC82Q8N4S0 544 aa12.17□□□□□ -0.46
CTSB-212ENST00000526645 FANCBQ8NB91 859 aa12.17□□□□□ -0.46
CTSB-212ENST00000526645 LPPQ93052 612 aa12.17□□□□□ -0.46
CTSB-212ENST00000526645 ZNF668Q96K58 619 aaPredicted RBP12.17□□□□□ -0.46
CTSB-212ENST00000526645 FAM193BQ96PV7 902 aaPredicted RBP12.17□□□□□ -0.46
CTSB-212ENST00000526645 DDX23Q9BUQ8 820 aaKnown RBP12.17□□□□□ -0.46
CTSB-212ENST00000526645 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
CTSB-212ENST00000526645 GMEB2Q9UKD1 530 aa12.17□□□□□ -0.46
CTSB-212ENST00000526645 USP18Q9UMW8 372 aa12.17□□□□□ -0.46
CTSB-212ENST00000526645 FAN1Q9Y2M0 1017 aa12.17□□□□□ -0.46
CTSB-212ENST00000526645 SAMM50Q9Y512 469 aa12.17□□□□□ -0.46
CTSB-212ENST00000526645 NUMBLQ9Y6R0 609 aa12.17□□□□□ -0.46
CTSB-212ENST00000526645 SMCO2A6NFE2 343 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 TEX28O15482 410 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 LILRB5O75023 590 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 RFPL2O75678 378 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 DNM2P50570 870 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 PFKPQ01813 784 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 TYW1BQ6NUM6 668 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 MTSS1LQ765P7 747 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 ZNF280BQ86YH2 543 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 GPR65Q8IYL9 337 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 CRYGNQ8WXF5 182 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 NELL1Q92832 810 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 ZNF707Q96C28 371 aaPredicted RBP12.16□□□□□ -0.46
CTSB-212ENST00000526645 FAM126AQ9BYI3 521 aaPredicted RBP12.16□□□□□ -0.46
CTSB-212ENST00000526645 RSAD1Q9HA92 442 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 RXFP1Q9HBX9 757 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.16□□□□□ -0.46
CTSB-212ENST00000526645 BARHL2Q9NY43 387 aa12.16□□□□□ -0.46
CTSB-212ENST00000526645 WDR81Q562E7 1941 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 MEIS3P2A8K0S8 358 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 C2CD2LO14523 706 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 NRP1O14786 923 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 ZNF862O60290 1169 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 B4GALT3O60512 393 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 CREMQ03060 361 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 CSTF1Q05048 431 aaKnown RBP12.15□□□□□ -0.46
CTSB-212ENST00000526645 MLF2Q15773 248 aaPredicted RBP12.15□□□□□ -0.46
CTSB-212ENST00000526645 SYNE3Q6ZMZ3 975 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 CATSPER4Q7RTX7 472 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 SGMS1Q86VZ5 419 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 MICU3Q86XE3 530 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 RNF168Q8IYW5 571 aaPredicted RBP12.15□□□□□ -0.46
CTSB-212ENST00000526645 NETO1Q8TDF5 533 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 PRKD2Q9BZL6 878 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 NT5C3AQ9H0P0 336 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 GPR179Q6PRD1 2367 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 MAP1BP46821 2468 aaKnown RBP12.15□□□□□ -0.46
CTSB-212ENST00000526645 MYH15Q9Y2K3 1946 aa12.15□□□□□ -0.46
CTSB-212ENST00000526645 A0A087WZ62 844 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 DCDC2BA2VCK2 349 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 NCAM2O15394 837 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 LRP3O75074 770 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 LRRN2O75325 713 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 CSDE1O75534 798 aaKnown RBP12.14□□□□□ -0.47
CTSB-212ENST00000526645 DDHD2O94830 711 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 SFNP31947 248 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 RPS9P46781 194 aaKnown RBP12.14□□□□□ -0.47
CTSB-212ENST00000526645 JAK3P52333 1124 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 DSG1Q02413 1049 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 UBXN2BQ14CS0 331 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 TARBP2Q15633 366 aaKnown RBP12.14□□□□□ -0.47
CTSB-212ENST00000526645 LONRF3Q496Y0 759 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 AGMOQ6ZNB7 445 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 MAP4K1Q92918 833 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 CHAMP1Q96JM3 812 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 NELL2Q99435 816 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 FDXACB1Q9BRP7 624 aaPredicted RBP12.14□□□□□ -0.47
CTSB-212ENST00000526645 UBN1Q9NPG3 1134 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 DISC1Q9NRI5 854 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 AGPAT5Q9NUQ2 364 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 MARCH5Q9NX47 278 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 PCDHB2Q9Y5E7 798 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 CACNA1IQ9P0X4 2223 aa12.14□□□□□ -0.47
CTSB-212ENST00000526645 MTCL1Q9Y4B5 1905 aaKnown RBP12.13□□□□□ -0.47
CTSB-212ENST00000526645 USP24Q9UPU5 2620 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 IGKV6-21A0A0C4DH24 114 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 ESYT2A0FGR8 921 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 SLC30A4O14863 429 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 SGSM2O43147 1006 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 NR1I2O75469 434 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 EFEMP2O95967 443 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 TGM1P22735 817 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 FSHRP23945 695 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 CHMLP26374 656 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 GPC5P78333 572 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 SNW1Q13573 536 aaKnown RBP12.13□□□□□ -0.47
CTSB-212ENST00000526645 PPM1JQ5JR12 505 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 ZBTB41Q5SVQ8 909 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 MRPL10Q7Z7H8 261 aaKnown RBP12.13□□□□□ -0.47
CTSB-212ENST00000526645 CNNM3Q8NE01 707 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 RDM1Q8NG50 284 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 DDX1Q92499 740 aaKnown RBP12.13□□□□□ -0.47
CTSB-212ENST00000526645 JPH2Q9BR39 696 aaPredicted RBP12.13□□□□□ -0.47
CTSB-212ENST00000526645 LTB4R2Q9NPC1 389 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 PRMT8Q9NR22 394 aaPredicted RBP12.13□□□□□ -0.47
CTSB-212ENST00000526645 FNIP2Q9P278 1114 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 CDH7Q9ULB5 785 aa12.13□□□□□ -0.47
CTSB-212ENST00000526645 RAB23Q9ULC3 237 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms