RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 DDX53Q86TM3 631 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 FAM83AQ86UY5 434 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 BOLLQ8N9W6 283 aaKnown RBP4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 SIMC1Q8NDZ2 872 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 PIK3C3Q8NEB9 887 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 COQ10AQ96MF6 247 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 PDCD2LQ9BRP1 358 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 SOX7Q9BT81 388 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 TEX101Q9BY14 249 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 PCIF1Q9H4Z3 704 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 DKK2Q9UBU2 259 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 FRMD4BQ9Y2L6 1034 aa4.28□□□□□ -1.72
ECHDC1-219ENST00000526299 A0A0A6YYJ9 748 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 PTPDC1A2A3K4 754 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 FAM221BA6H8Z2 402 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 UNC119BA6NIH7 251 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 HKR1P10072 659 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 GAAP10253 952 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 ATP2B1P20020 1258 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 PTX3P26022 381 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 CASRP41180 1078 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 ADCY2Q08462 1091 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 ZNF174Q15697 407 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 IQSEC1Q6DN90 963 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 XYLT1Q86Y38 959 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 GLB1L3Q8NCI6 653 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 OR5M3Q8NGP4 307 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 ZNF428Q96B54 188 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 DNAJC7Q99615 494 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 LRFN3Q9BTN0 628 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 OSBPL6Q9BZF3 934 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 PITHD1Q9GZP4 211 aaPredicted RBP4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 MTG2Q9H4K7 406 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 SAMD15Q9P1V8 674 aa4.27□□□□□ -1.73
ECHDC1-219ENST00000526299 CCDC163A0A0D9SF12 145 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 MYADML2A6NDP7 307 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 H7C1D1 291 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 MAFGO15525 162 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 KCNQ2O43526 872 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 ALDH1A2O94788 518 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 FSBPO95073 299 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 SLC9A1P19634 815 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 RNASE9P60153 205 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 MAN2A1Q16706 1144 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 ERCC6LQ2NKX8 1250 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 BEAN1Q3B7T3 259 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 TIGD7Q6NT04 549 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 UNQ6494/PRO21346Q6UXR6 183 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 HDGFL2Q7Z4V5 671 aaPredicted RBP4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 NME9Q86XW9 330 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 KIAA1958Q8N8K9 716 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 CPEB3Q8NE35 698 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 DCLRE1CQ96SD1 692 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 NOL10Q9BSC4 688 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 MRPL4Q9BYD3 311 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 TRIM39Q9HCM9 518 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 ALG13Q9NP73 1137 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 HDAC5Q9UQL6 1122 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 CHST2Q9Y4C5 530 aa4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 TNPO3Q9Y5L0 923 aaKnown RBP4.26□□□□□ -1.73
ECHDC1-219ENST00000526299 PIPSLA2A3N6 862 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 NRP1O14786 923 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 GLRX3O76003 335 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 PRPF6O94906 941 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 C1RP00736 705 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 ELLP55199 621 aaPredicted RBP4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 ADCY1Q08828 1119 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 MRPL49Q13405 166 aaKnown RBP4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 TP53BP2Q13625 1128 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 KANSL1Q7Z3B3 1105 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 CHST14Q8NCH0 376 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 ZSWIM2Q8NEG5 633 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 NELL1Q92832 810 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 DEPDC7Q96QD5 511 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 SPATA5L1Q9BVQ7 753 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 CABP5Q9NP86 173 aa4.25□□□□□ -1.73
ECHDC1-219ENST00000526299 GAGE12BA1L429 117 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 GAGE12HA6NDE8 117 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 OPHN1O60890 802 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 ZSCAN20P17040 1043 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 GTF2F1P35269 517 aaKnown RBP eCLIP4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 BMPR1AP36894 532 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 RANGAP1P46060 587 aaPredicted RBP4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 GUCY1B3Q02153 619 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 NHLH2Q02577 135 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 EPHA7Q15375 998 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 ZCCHC8Q6NZY4 707 aaKnown RBP4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 DOK3Q7L591 496 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 SYT12Q8IV01 421 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 ASB10Q8WXI3 467 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 IL17RAQ96F46 866 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 ADAM2Q99965 735 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 MYL10Q9BUA6 226 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 TANGO6Q9C0B7 1094 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 RNF7Q9UBF6 113 aa4.24□□□□□ -1.73
ECHDC1-219ENST00000526299 B4E1Z4 1266 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 RAPGEF3O95398 923 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 CD69Q07108 199 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 FOXF2Q12947 444 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms