RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 FIZ1Q96SL8 496 aa14.25□□□□□ -0.13
SMPD1-202ENST00000526280 ZHX3Q9H4I2 956 aa14.25□□□□□ -0.13
SMPD1-202ENST00000526280 DACT1Q9NYF0 836 aa14.25□□□□□ -0.13
SMPD1-202ENST00000526280 PTPRSQ13332 1948 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 A0A0U1RQF3 1178 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 FRMD3A2A2Y4 597 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 B4GALT5O43286 388 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 TRAK2O60296 914 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 GADD45BO75293 160 aaPredicted RBP14.24□□□□□ -0.13
SMPD1-202ENST00000526280 GJB5O95377 273 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 PRKCBP05771 671 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 MAPTP10636 758 aaKnown RBP14.24□□□□□ -0.13
SMPD1-202ENST00000526280 IDEP14735 1019 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 GAP43P17677 238 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 ARF4P18085 180 aaPredicted RBP14.24□□□□□ -0.13
SMPD1-202ENST00000526280 AFMP43652 599 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 SNW1Q13573 536 aaKnown RBP14.24□□□□□ -0.13
SMPD1-202ENST00000526280 TAS1R3Q7RTX0 852 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 ENGASEQ8NFI3 743 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 CPB2Q96IY4 423 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 PANK4Q9NVE7 773 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 SEL1LQ9UBV2 794 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 PHLPP2Q6ZVD8 1323 aa14.24□□□□□ -0.13
SMPD1-202ENST00000526280 A0A1B0GUA9 196 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 TTLL13PA6NNM8 815 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 H0YCG3 227 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 UPP2O95045 317 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 LIG1P18858 919 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 SCP2P22307 547 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 RABGGTBP53611 331 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 FAM160A1Q05DH4 1040 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 PRPF4BQ13523 1007 aaKnown RBP14.23□□□□□ -0.13
SMPD1-202ENST00000526280 UBXN11Q5T124 520 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 TWF2Q6IBS0 349 aaKnown RBP14.23□□□□□ -0.13
SMPD1-202ENST00000526280 FAM117BQ6P1L5 589 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 NOTUMQ6P988 496 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 KRBA2Q6ZNG9 492 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 HAUS6Q7Z4H7 955 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 SFR1Q86XK3 245 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 ECHDC2Q86YB7 292 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 NPAS4Q8IUM7 802 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 FAM178BQ8IXR5 827 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 CCDC65Q8IXS2 484 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 GRAMD1CQ8IYS0 662 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 SLC17A8Q8NDX2 589 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 CNNM3Q8NE01 707 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 CCDC51Q96ER9 411 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 LRCH3Q96II8 777 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 ELAC1Q9H777 363 aaKnown RBP14.23□□□□□ -0.13
SMPD1-202ENST00000526280 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
SMPD1-202ENST00000526280 CNTNAP2Q9UHC6 1331 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 PCDHB7Q9Y5E2 793 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 PCDHA11Q9Y5I1 949 aa14.23□□□□□ -0.13
SMPD1-202ENST00000526280 ZNF623O75123 536 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 PRPF40AO75400 957 aaKnown RBP14.22□□□□□ -0.13
SMPD1-202ENST00000526280 EDN1P05305 212 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 STAG3L1P0CL83 205 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 SKIP12755 728 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 CASP1P29466 404 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 NMT1P30419 496 aaKnown RBP14.22□□□□□ -0.13
SMPD1-202ENST00000526280 PBX2P40425 430 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 ASIC1P78348 528 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 HTRA4P83105 476 aaPredicted RBP14.22□□□□□ -0.13
SMPD1-202ENST00000526280 CUL4BQ13620 913 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 HERC4Q5GLZ8 1057 aaPredicted RBP14.22□□□□□ -0.13
SMPD1-202ENST00000526280 NT5DC1Q5TFE4 455 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 ZNF720Q7Z2F6 126 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 RAD9AQ99638 391 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 ZBED2Q9BTP6 218 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 PBX4Q9BYU1 374 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 BLZF1Q9H2G9 400 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 ST6GALNAC4Q9H4F1 302 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 OLFML3Q9NRN5 406 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 FAM105AQ9NUU6 356 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 TMEM161AQ9NX61 479 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 USP20Q9Y2K6 914 aa14.22□□□□□ -0.13
SMPD1-202ENST00000526280 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.21□□□□□ -0.13
SMPD1-202ENST00000526280 PVALEFA0A1B0GWK0 134 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 K7ENM7 598 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 GTPBP6O43824 516 aaPredicted RBP14.21□□□□□ -0.13
SMPD1-202ENST00000526280 TLL1O43897 1013 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 EOMESO95936 686 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 MYL1P05976 194 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 ABCD1P33897 745 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 DEKP35659 375 aaKnown RBP14.21□□□□□ -0.13
SMPD1-202ENST00000526280 RAB27AP51159 221 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 UBE2HP62256 183 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 GTF2BQ00403 316 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 STRN3Q13033 797 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 COASYQ13057 564 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 RAB30Q15771 203 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 SLC27A1Q6PCB7 646 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 UNC13DQ70J99 1090 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 ZNF598Q86UK7 904 aaKnown RBP14.21□□□□□ -0.13
SMPD1-202ENST00000526280 ACO2Q99798 780 aaKnown RBP14.21□□□□□ -0.13
SMPD1-202ENST00000526280 STRA6Q9BX79 667 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 EIF2AQ9BY44 585 aaKnown RBP14.21□□□□□ -0.13
SMPD1-202ENST00000526280 MRPL4Q9BYD3 311 aaKnown RBP14.21□□□□□ -0.13
SMPD1-202ENST00000526280 PDZD7Q9H5P4 517 aa14.21□□□□□ -0.13
SMPD1-202ENST00000526280 MRPL44Q9H9J2 332 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms