RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 PACSIN3Q9UKS6 424 aa6.15□□□□□ -1.42
CSDE1-210ENST00000525878 AHRRA9YTQ3 701 aa6.14□□□□□ -1.43
CSDE1-210ENST00000525878 SEC24DO94855 1032 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-210ENST00000525878 ABHD16AO95870 558 aa6.14□□□□□ -1.43
CSDE1-210ENST00000525878 F2P00734 622 aa6.14□□□□□ -1.43
CSDE1-210ENST00000525878 POU3F2P20265 443 aaPredicted RBP6.14□□□□□ -1.43
CSDE1-210ENST00000525878 PTTG1IPP53801 180 aa6.14□□□□□ -1.43
CSDE1-210ENST00000525878 CD69Q07108 199 aa6.14□□□□□ -1.43
CSDE1-210ENST00000525878 DPY19L2P1Q6NXN4 242 aa6.14□□□□□ -1.43
CSDE1-210ENST00000525878 EFHBQ8N7U6 833 aa6.14□□□□□ -1.43
CSDE1-210ENST00000525878 CPT1CQ8TCG5 803 aa6.14□□□□□ -1.43
CSDE1-210ENST00000525878 LSM14BQ9BX40 385 aaKnown RBP6.14□□□□□ -1.43
CSDE1-210ENST00000525878 CPEB1Q9BZB8 566 aaKnown RBP6.14□□□□□ -1.43
CSDE1-210ENST00000525878 USP36Q9P275 1121 aaKnown RBP6.14□□□□□ -1.43
CSDE1-210ENST00000525878 TGM5O43548 720 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 ASMTLO95671 621 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 LY86O95711 162 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 CD40P25942 277 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 MRPL49Q13405 166 aaKnown RBP6.13□□□□□ -1.43
CSDE1-210ENST00000525878 BMS1Q14692 1282 aaKnown RBP6.13□□□□□ -1.43
CSDE1-210ENST00000525878 PTPAQ15257 358 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 VPS72Q15906 364 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 PLEKHG4Q58EX7 1191 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 ZBTB41Q5SVQ8 909 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 ZNF496Q96IT1 587 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-210ENST00000525878 FDXACB1Q9BRP7 624 aaPredicted RBP6.13□□□□□ -1.43
CSDE1-210ENST00000525878 MTFR1LQ9H019 292 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 KCNH6Q9H252 994 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.13□□□□□ -1.43
CSDE1-210ENST00000525878 ZKSCAN5Q9Y2L8 839 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 PCDHB6Q9Y5E3 794 aa6.13□□□□□ -1.43
CSDE1-210ENST00000525878 DNAJC6O75061 913 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 RECQL4O94761 1208 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 PCDH8O95206 1070 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 PFKMP08237 780 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 CASRP41180 1078 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 WNT3AP56704 352 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 GPR158Q5T848 1215 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 KCNV1Q6PIU1 500 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 DOK3Q7L591 496 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 TAS1R1Q7RTX1 841 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 FAM83AQ86UY5 434 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 PRIMA1Q86XR5 153 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 SYNPOQ8N3V7 929 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 CDYL2Q8N8U2 506 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 GLB1L3Q8NCI6 653 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-210ENST00000525878 VOPP1Q96AW1 172 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 MYEOVQ96EZ4 313 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 CPPED1Q9BRF8 314 aaPredicted RBP6.12□□□□□ -1.43
CSDE1-210ENST00000525878 ZNF768Q9H5H4 540 aaKnown RBP6.12□□□□□ -1.43
CSDE1-210ENST00000525878 PODXL2Q9NZ53 605 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 TNFRSF18Q9Y5U5 241 aa6.12□□□□□ -1.43
CSDE1-210ENST00000525878 SCAF4O95104 1147 aaKnown RBP6.11□□□□□ -1.43
CSDE1-210ENST00000525878 GPR15P49685 360 aa6.11□□□□□ -1.43
CSDE1-210ENST00000525878 IQSEC1Q6DN90 963 aa6.11□□□□□ -1.43
CSDE1-210ENST00000525878 ESPNLQ6ZVH7 1005 aa6.11□□□□□ -1.43
CSDE1-210ENST00000525878 GPRIN1Q7Z2K8 1008 aa6.11□□□□□ -1.43
CSDE1-210ENST00000525878 NXPE1Q8N323 547 aa6.11□□□□□ -1.43
CSDE1-210ENST00000525878 NDC1Q9BTX1 674 aa6.11□□□□□ -1.43
CSDE1-210ENST00000525878 SLC46A2Q9BY10 475 aa6.11□□□□□ -1.43
CSDE1-210ENST00000525878 TOR3AQ9H497 397 aa6.11□□□□□ -1.43
CSDE1-210ENST00000525878 IFT57Q9NWB7 429 aa6.11□□□□□ -1.43
CSDE1-210ENST00000525878 A0A1W2PR48 441 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 TMEM200CA6NKL6 621 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 ZNF891A8MT65 544 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-210ENST00000525878 B3GALT2O43825 422 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 GAS7O60861 476 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 GYPEP15421 78 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 FAM189BP81408 668 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 TIGD2Q4W5G0 525 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 CCDC178Q5BJE1 867 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 MSL3Q8N5Y2 521 aaKnown RBP6.1□□□□□ -1.43
CSDE1-210ENST00000525878 LILRA3Q8N6C8 439 aaPredicted RBP6.1□□□□□ -1.43
CSDE1-210ENST00000525878 OR5M3Q8NGP4 307 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 CHTF18Q8WVB6 975 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 IL17RAQ96F46 866 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 MRFAP1L1Q96HT8 127 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 DKK2Q9UBU2 259 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 MSRAQ9UJ68 235 aa6.1□□□□□ -1.43
CSDE1-210ENST00000525878 CENPVL1A0A0U1RR11 272 aa6.09□□□□□ -1.43
CSDE1-210ENST00000525878 LAG3P18627 525 aa6.09□□□□□ -1.43
CSDE1-210ENST00000525878 GZMKP49863 264 aa6.09□□□□□ -1.43
CSDE1-210ENST00000525878 PHC1P78364 1004 aa6.09□□□□□ -1.43
CSDE1-210ENST00000525878 TAP1Q03518 808 aa6.09□□□□□ -1.43
CSDE1-210ENST00000525878 PASD1Q8IV76 773 aa6.09□□□□□ -1.43
CSDE1-210ENST00000525878 GAB3Q8WWW8 586 aa6.09□□□□□ -1.43
CSDE1-210ENST00000525878 EIF2B4Q9UI10 523 aaKnown RBP6.09□□□□□ -1.43
CSDE1-210ENST00000525878 TMPRSS11EQ9UL52 423 aa6.09□□□□□ -1.43
CSDE1-210ENST00000525878 CHST2Q9Y4C5 530 aa6.09□□□□□ -1.43
CSDE1-210ENST00000525878 KPNA6O60684 536 aa6.08□□□□□ -1.44
CSDE1-210ENST00000525878 APOBEC3AP31941 199 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-210ENST00000525878 CSRP2Q16527 193 aa6.08□□□□□ -1.44
CSDE1-210ENST00000525878 HECTD2Q5U5R9 776 aa6.08□□□□□ -1.44
CSDE1-210ENST00000525878 LYSMD2Q8IV50 215 aa6.08□□□□□ -1.44
CSDE1-210ENST00000525878 ZNF610Q8N9Z0 462 aa6.08□□□□□ -1.44
CSDE1-210ENST00000525878 BEND2Q8NDZ0 799 aa6.08□□□□□ -1.44
CSDE1-210ENST00000525878 NTN5Q8WTR8 489 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-210ENST00000525878 DCLRE1CQ96SD1 692 aaKnown RBP6.08□□□□□ -1.44
CSDE1-210ENST00000525878 SYNPO2LQ9H987 977 aa6.08□□□□□ -1.44
CSDE1-210ENST00000525878 THG1LQ9NWX6 298 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms