RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 ABI1Q8IZP0 508 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 SPRYD3Q8NCJ5 442 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 AK8Q96MA6 479 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 USP28Q96RU2 1077 aa13.13□□□□□ -0.31
CDC27-202ENST00000525495 EDN1P05305 212 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 SKIP12755 728 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 AXLP30530 894 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 LONP1P36776 959 aaKnown RBP13.12□□□□□ -0.31
CDC27-202ENST00000525495 NAMPTP43490 491 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 AFF1P51825 1210 aaKnown RBP13.12□□□□□ -0.31
CDC27-202ENST00000525495 TFF2Q03403 129 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 MAPK7Q13164 816 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 SPECC1Q5M775 1068 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 NOTUMQ6P988 496 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 USP49Q70CQ1 688 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 MRPL10Q7Z7H8 261 aaKnown RBP13.12□□□□□ -0.31
CDC27-202ENST00000525495 LRRC43Q8N309 656 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 SYT2Q8N9I0 419 aaPredicted RBP13.12□□□□□ -0.31
CDC27-202ENST00000525495 COLGALT1Q8NBJ5 622 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 SMG8Q8ND04 991 aaKnown RBP13.12□□□□□ -0.31
CDC27-202ENST00000525495 SPPL3Q8TCT6 385 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 CCDC113Q9H0I3 377 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 NT5C3AQ9H0P0 336 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 CSRNP2Q9H175 543 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 FZD8Q9H461 694 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 ZSCAN16Q9H4T2 348 aaPredicted RBP13.12□□□□□ -0.31
CDC27-202ENST00000525495 FBXO2Q9UK22 296 aaPredicted RBP13.12□□□□□ -0.31
CDC27-202ENST00000525495 USP20Q9Y2K6 914 aa13.12□□□□□ -0.31
CDC27-202ENST00000525495 HIP1RO75146 1068 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 OFD1O75665 1012 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 HSP90AA1P07900 732 aaKnown RBP13.11□□□□□ -0.31
CDC27-202ENST00000525495 NCLP19338 710 aaKnown RBP13.11□□□□□ -0.31
CDC27-202ENST00000525495 UBA7P41226 1012 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 SLC12A3P55017 1021 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 PKP1Q13835 747 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 KARSQ15046 597 aaKnown RBP13.11□□□□□ -0.31
CDC27-202ENST00000525495 PTPROQ16827 1216 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 NAALADL2Q58DX5 795 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 FOXD4L5Q5VV16 416 aaPredicted RBP13.11□□□□□ -0.31
CDC27-202ENST00000525495 FOXD4L4Q8WXT5 416 aaPredicted RBP13.11□□□□□ -0.31
CDC27-202ENST00000525495 KIFAP3Q92845 792 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 EPSTI1Q96J88 318 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 CDK5RAP3Q96JB5 506 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 BLOC1S4Q9NUP1 217 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 THEGQ9P2T0 379 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 INPP5FQ9Y2H2 1132 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 HES2Q9Y543 173 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 IPPQ9Y573 584 aa13.11□□□□□ -0.31
CDC27-202ENST00000525495 A0A1B0GUA9 196 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 SFI1A8K8P3 1242 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 B4GALT3O60512 393 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 FGF18O76093 207 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 SSBP05455 408 aaKnown RBP eCLIP13.1□□□□□ -0.31
CDC27-202ENST00000525495 PLA2G4BP0C869 781 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 LAG3P18627 525 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 IRS1P35568 1242 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 RAD51AP2Q09MP3 1159 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 PPP2R5AQ15172 486 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 FAM187BQ17R55 369 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 TIGD5Q53EQ6 642 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 TCEAL5Q5H9L2 206 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 KCNT2Q6UVM3 1135 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 GLB1LQ6UWU2 654 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 ZBTB8OSQ8IWT0 167 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 DEPTORQ8TB45 409 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 POF1BQ8WVV4 589 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 CCDC51Q96ER9 411 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 LMAN2LQ9H0V9 348 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 C2orf40Q9H1Z8 148 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 NXF3Q9H4D5 531 aaKnown RBP13.1□□□□□ -0.31
CDC27-202ENST00000525495 AAASQ9NRG9 546 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 TBC1D13Q9NVG8 400 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 PRMT7Q9NVM4 692 aaPredicted RBP13.1□□□□□ -0.31
CDC27-202ENST00000525495 PCDHB12Q9Y5F1 795 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 PCDHGC5Q9Y5F6 944 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 SRPRBQ9Y5M8 271 aaKnown RBP13.1□□□□□ -0.31
CDC27-202ENST00000525495 CNTNAP2Q9UHC6 1331 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 NPHP3-ACAD11A0A0J9YXS1 232 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 PRKCBP05771 671 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 LIG1P18858 919 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 PLCG1P19174 1290 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 GUCY2CP25092 1073 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 NPTX2P47972 431 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 PEX3P56589 373 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 NCBP1Q09161 790 aaKnown RBP13.1□□□□□ -0.31
CDC27-202ENST00000525495 SLC39A14Q15043 492 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 MAPK6Q16659 721 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 ARSHQ5FYA8 562 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 NOMO2Q5JPE7 1267 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 THNSL1Q8IYQ7 743 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 KCTD17Q8N5Z5 321 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 PGBD4Q96DM1 585 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 CALML4Q96GE6 196 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 IFT74Q96LB3 600 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 PRIMPOLQ96LW4 560 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 MRPL9Q9BYD2 267 aaKnown RBP13.1□□□□□ -0.31
CDC27-202ENST00000525495 CCSER1Q9C0I3 900 aa13.1□□□□□ -0.31
CDC27-202ENST00000525495 NSUN3Q9H649 340 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms