RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 INSL6Q9Y581 213 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 PCDHB7Q9Y5E2 793 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 PCDHA11Q9Y5I1 949 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 LOXHD1Q8IVV2 1947 aa13.64□□□□□ -0.23
CCS-202ENST00000525435 MGEA5O60502 916 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 TSPAN1O60635 241 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 FGFR4P22455 802 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 NCKAP1LP55160 1127 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 DEFB103AP81534 67 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 FAM160A1Q05DH4 1040 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 PRPF4BQ13523 1007 aaKnown RBP13.63□□□□□ -0.23
CCS-202ENST00000525435 TWF2Q6IBS0 349 aaKnown RBP13.63□□□□□ -0.23
CCS-202ENST00000525435 DYMQ7RTS9 669 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 ZNF720Q7Z2F6 126 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 HAUS6Q7Z4H7 955 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 APBB1IPQ7Z5R6 666 aaPredicted RBP13.63□□□□□ -0.23
CCS-202ENST00000525435 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 ELOA2Q8IYF1 753 aaPredicted RBP13.63□□□□□ -0.23
CCS-202ENST00000525435 MYOCDQ8IZQ8 938 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 FMR1NBQ8N0W7 255 aaPredicted RBP13.63□□□□□ -0.23
CCS-202ENST00000525435 ENGASEQ8NFI3 743 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 LINC01599Q8WXQ3 324 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 PAGE5Q96GU1 130 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 TIGD1Q96MW7 591 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 ZBED2Q9BTP6 218 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 TMEM161AQ9NX61 479 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 SERTAD1Q9UHV2 236 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 CNTNAP2Q9UHC6 1331 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 SCN5AQ14524 2016 aa13.63□□□□□ -0.23
CCS-202ENST00000525435 N4BP3O15049 544 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 SLC16A4O15374 487 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 HOXA2O43364 376 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 PRKCBP05771 671 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 ARF4P18085 180 aaPredicted RBP13.62□□□□□ -0.23
CCS-202ENST00000525435 UBE2HP62256 183 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 HTRA4P83105 476 aaPredicted RBP13.62□□□□□ -0.23
CCS-202ENST00000525435 GTF2BQ00403 316 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 STRN3Q13033 797 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 ALCAMQ13740 583 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 HERC4Q5GLZ8 1057 aaPredicted RBP13.62□□□□□ -0.23
CCS-202ENST00000525435 KRBA2Q6ZNG9 492 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 MRPL10Q7Z7H8 261 aaKnown RBP13.62□□□□□ -0.23
CCS-202ENST00000525435 ECHDC2Q86YB7 292 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 HVCN1Q96D96 273 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 GBP4Q96PP9 640 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 MRPL4Q9BYD3 311 aaKnown RBP13.62□□□□□ -0.23
CCS-202ENST00000525435 GOLPH3LQ9H4A5 285 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 ZHX3Q9H4I2 956 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 PANK4Q9NVE7 773 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 PCDHB13Q9Y5F0 798 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 ADGRA3Q8IWK6 1321 aa13.62□□□□□ -0.23
CCS-202ENST00000525435 TCHHQ07283 1943 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 TMEM265A0A087WTH1 108 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 GTPBP6O43824 516 aaPredicted RBP13.61□□□□□ -0.23
CCS-202ENST00000525435 TLL1O43897 1013 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 IDEP14735 1019 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 FXR1P51114 621 aaKnown RBP eCLIP13.61□□□□□ -0.23
CCS-202ENST00000525435 CACNB1Q02641 598 aaPredicted RBP13.61□□□□□ -0.23
CCS-202ENST00000525435 SNW1Q13573 536 aaKnown RBP13.61□□□□□ -0.23
CCS-202ENST00000525435 SLC27A1Q6PCB7 646 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 ZPBP2Q6X784 338 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 STXBP4Q6ZWJ1 553 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 UNC13DQ70J99 1090 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 ZNF598Q86UK7 904 aaKnown RBP13.61□□□□□ -0.23
CCS-202ENST00000525435 HACE1Q8IYU2 909 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 STAMQ92783 540 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 PGBD4Q96DM1 585 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 FIZ1Q96SL8 496 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 ADPGKQ9BRR6 497 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 KIFC3Q9BVG8 833 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 MRPL44Q9H9J2 332 aaKnown RBP13.61□□□□□ -0.23
CCS-202ENST00000525435 UBN1Q9NPG3 1134 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 FAM105AQ9NUU6 356 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 HOOK1Q9UJC3 728 aaKnown RBP13.61□□□□□ -0.23
CCS-202ENST00000525435 LRFN2Q9ULH4 789 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 TBX20Q9UMR3 447 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 TNFSF13BQ9Y275 285 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 PCDHB2Q9Y5E7 798 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 ARID2Q68CP9 1835 aa13.61□□□□□ -0.23
CCS-202ENST00000525435 DGKIO75912 1065 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 PIGRP01833 764 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 AFMP43652 599 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 TTC3P53804 2025 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 ASIC1P78348 528 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 PSMD2Q13200 908 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 UBXN11Q5T124 520 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 NT5DC1Q5TFE4 455 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 ATF7IP2Q5U623 682 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 FAM109BQ6ICB4 259 aaPredicted RBP13.6□□□□□ -0.23
CCS-202ENST00000525435 TAS1R3Q7RTX0 852 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 SFR1Q86XK3 245 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 ZNF689Q96CS4 500 aaPredicted RBP13.6□□□□□ -0.23
CCS-202ENST00000525435 ACO2Q99798 780 aaKnown RBP13.6□□□□□ -0.23
CCS-202ENST00000525435 STRA6Q9BX79 667 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 PBX4Q9BYU1 374 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 PTPRHQ9HD43 1115 aa13.6□□□□□ -0.23
CCS-202ENST00000525435 GRXCR1A8MXD5 290 aa13.59□□□□□ -0.23
CCS-202ENST00000525435 GOLGA6L22H0YM25 854 aa13.59□□□□□ -0.23
CCS-202ENST00000525435 K7ENM7 598 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms