RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 C4orf19Q8IY42 314 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 SLC22A17Q8WUG5 538 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 PRPF31Q8WWY3 499 aaKnown RBP13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 SLC7A3Q8WY07 619 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 RSPH1Q8WYR4 309 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 PGBD4Q96DM1 585 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 DYDC2Q96IM9 177 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 NR2E1Q9Y466 385 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 ZDBF2Q9HCK1 2354 aa13.12□□□□□ -0.31
NDUFS3-204ENST00000525378 TBX3O15119 743 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 YWHABP31946 246 aaKnown RBP13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 MTHFRP42898 656 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 CYP4A11Q02928 519 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 NR5A1Q13285 461 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 EMC2Q15006 297 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 PTPN14Q15678 1187 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 FERMT3Q86UX7 667 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 RNF149Q8NC42 400 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 KREMEN2Q8NCW0 462 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 PSPC1Q8WXF1 523 aaKnown RBP13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 NECTIN4Q96NY8 510 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 SMOC2Q9H3U7 446 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 RSAD1Q9HA92 442 aa13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 ORC3Q9UBD5 711 aaPredicted RBP13.11□□□□□ -0.31
NDUFS3-204ENST00000525378 MARCH6O60337 910 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 BRD1O95696 1058 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 POMCP01189 267 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 FDPSP14324 419 aaKnown RBP13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 XBP1P17861 261 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 AVPR2P30518 371 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 RFC5P40937 340 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 PTPN5P54829 565 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 GIT2Q14161 759 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 XKR9Q5GH70 373 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 KIAA1841Q6NSI8 718 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 TMEM87AQ8NBN3 555 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 SMG8Q8ND04 991 aaKnown RBP13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 URGCPQ8TCY9 931 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 TNFRSF25Q93038 417 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 RIPOR3Q96MK2 946 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 KLHL5Q96PQ7 755 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 MTRQ99707 1265 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 XPNPEP1Q9NQW7 623 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 DZANK1Q9NVP4 752 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 SORCS3Q9UPU3 1222 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 PPME1Q9Y570 386 aa13.1□□□□□ -0.31
NDUFS3-204ENST00000525378 CARNS1A5YM72 827 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 WNT7AO00755 349 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 NRP1O14786 923 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 ASAP2O43150 1006 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 LILRB3O75022 631 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 SLITRK3O94933 977 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 LARGE1O95461 756 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 SSBP05455 408 aaKnown RBP eCLIP13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 ASGR2P07307 311 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 NCLP19338 710 aaKnown RBP13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 AK2P54819 239 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 ATAT1Q5SQI0 421 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 TMC5Q6UXY8 1006 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 OTUD6AQ7L8S5 288 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 TPH2Q8IWU9 490 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 EXOC8Q8IYI6 725 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 SLFN12Q8IYM2 578 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 NECAB1Q8N987 351 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 TCP11Q8WWU5 503 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 DOCK6Q96HP0 2047 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 CPB2Q96IY4 423 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 NAP1L4Q99733 375 aaKnown RBP13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 PRRX2Q99811 253 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 TMEM175Q9BSA9 504 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 EIF2AQ9BY44 585 aaKnown RBP13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 RNF39Q9H2S5 420 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 ZSWIM4Q9H7M6 989 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 MIOSQ9NXC5 875 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 DBR1Q9UK59 544 aaKnown RBP13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 FAN1Q9Y2M0 1017 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 CNTNAP2Q9UHC6 1331 aa13.09□□□□□ -0.31
NDUFS3-204ENST00000525378 DOCK8Q8NF50 2099 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 GAS2O43903 313 aaKnown RBP13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 TSPAN1O60635 241 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 BAG4O95429 457 aaKnown RBP13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 ALDH2P05091 517 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 KRT2P35908 639 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 CLCN4P51793 760 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 PTENP60484 403 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 MTMR3Q13615 1198 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 CABP7Q86V35 215 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 TDRD5Q8NAT2 981 aaKnown RBP13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 FAM193BQ96PV7 902 aaPredicted RBP13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 EIF2AK1Q9BQI3 630 aaKnown RBP13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 FAM86C1Q9NVL1 165 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 MARCH5Q9NX47 278 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 KANSL3Q9P2N6 904 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 LIMD1Q9UGP4 676 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 HES2Q9Y543 173 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 IPPQ9Y573 584 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 TRIP11Q15643 1979 aa13.08□□□□□ -0.32
NDUFS3-204ENST00000525378 A0A087WWV3 80 aa13.07□□□□□ -0.32
NDUFS3-204ENST00000525378 C2CD2LO14523 706 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms