RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 MINDY3Q9H8M7 445 aa26.81■■□□□ 1.88
USP47-205ENST00000525257 SFXN1Q9H9B4 322 aa26.81■■□□□ 1.88
USP47-205ENST00000525257 RSAD1Q9HA92 442 aa26.81■■□□□ 1.88
USP47-205ENST00000525257 WRAP73Q9P2S5 460 aaPredicted RBP26.81■■□□□ 1.88
USP47-205ENST00000525257 KCNJ14Q9UNX9 436 aa26.81■■□□□ 1.88
USP47-205ENST00000525257 DMDP11532 3685 aa26.8■■□□□ 1.88
USP47-205ENST00000525257 SRGAP2CP0DJJ0 459 aa26.8■■□□□ 1.88
USP47-205ENST00000525257 PPP2R5CQ13362 524 aa26.8■■□□□ 1.88
USP47-205ENST00000525257 PRPF31Q8WWY3 499 aaKnown RBP26.8■■□□□ 1.88
USP47-205ENST00000525257 ZNF274Q96GC6 653 aaPredicted RBP26.8■■□□□ 1.88
USP47-205ENST00000525257 KLHL5Q96PQ7 755 aa26.8■■□□□ 1.88
USP47-205ENST00000525257 EMILIN2Q9BXX0 1053 aa26.8■■□□□ 1.88
USP47-205ENST00000525257 MFSD1Q9H3U5 465 aa26.8■■□□□ 1.88
USP47-205ENST00000525257 CYP46A1Q9Y6A2 500 aa26.8■■□□□ 1.88
USP47-205ENST00000525257 KLRC2P26717 231 aa26.79■■□□□ 1.88
USP47-205ENST00000525257 CPLX2Q6PUV4 134 aaKnown RBP26.79■■□□□ 1.88
USP47-205ENST00000525257 MRPL10Q7Z7H8 261 aaKnown RBP26.79■■□□□ 1.88
USP47-205ENST00000525257 GPR149Q86SP6 731 aa26.79■■□□□ 1.88
USP47-205ENST00000525257 PSPC1Q8WXF1 523 aaKnown RBP26.79■■□□□ 1.88
USP47-205ENST00000525257 FAM193BQ96PV7 902 aaPredicted RBP26.79■■□□□ 1.88
USP47-205ENST00000525257 KCNMB3Q9NPA1 279 aa26.79■■□□□ 1.88
USP47-205ENST00000525257 C2orf16Q68DN1 1984 aa26.78■■□□□ 1.88
USP47-205ENST00000525257 DKC1O60832 514 aaKnown RBP eCLIP26.78■■□□□ 1.88
USP47-205ENST00000525257 POMCP01189 267 aa26.78■■□□□ 1.88
USP47-205ENST00000525257 CNPP09543 421 aaKnown RBP26.78■■□□□ 1.88
USP47-205ENST00000525257 CLCN4P51793 760 aa26.78■■□□□ 1.88
USP47-205ENST00000525257 LAMTOR4Q0VGL1 99 aa26.78■■□□□ 1.88
USP47-205ENST00000525257 UBXN11Q5T124 520 aa26.78■■□□□ 1.88
USP47-205ENST00000525257 ASTLQ6HA08 431 aaPredicted RBP26.78■■□□□ 1.88
USP47-205ENST00000525257 CCDC149Q6ZUS6 474 aa26.78■■□□□ 1.88
USP47-205ENST00000525257 SRGAP1Q7Z6B7 1085 aa26.78■■□□□ 1.88
USP47-205ENST00000525257 FAM177A1Q8N128 213 aaPredicted RBP26.78■■□□□ 1.88
USP47-205ENST00000525257 ACSF2Q96CM8 615 aaPredicted RBP26.78■■□□□ 1.88
USP47-205ENST00000525257 DHX33Q9H6R0 707 aaKnown RBP26.78■■□□□ 1.88
USP47-205ENST00000525257 FAN1Q9Y2M0 1017 aa26.78■■□□□ 1.88
USP47-205ENST00000525257 CNTNAP2Q9UHC6 1331 aa26.78■■□□□ 1.88
USP47-205ENST00000525257 CCDC194A0A1B0GVG4 234 aa26.77■■□□□ 1.88
USP47-205ENST00000525257 P4HBP07237 508 aaKnown RBP26.77■■□□□ 1.88
USP47-205ENST00000525257 HOXA11P31270 313 aaPredicted RBP26.77■■□□□ 1.88
USP47-205ENST00000525257 RFC5P40937 340 aa26.77■■□□□ 1.88
USP47-205ENST00000525257 FAM20AQ96MK3 541 aa26.77■■□□□ 1.88
USP47-205ENST00000525257 LXNQ9BS40 222 aa26.77■■□□□ 1.88
USP47-205ENST00000525257 TMEM175Q9BSA9 504 aa26.77■■□□□ 1.88
USP47-205ENST00000525257 STK39Q9UEW8 545 aa26.77■■□□□ 1.88
USP47-205ENST00000525257 ARID2Q68CP9 1835 aa26.76■■□□□ 1.88
USP47-205ENST00000525257 C2CD2LO14523 706 aa26.76■■□□□ 1.87
USP47-205ENST00000525257 NRP1O14786 923 aa26.76■■□□□ 1.87
USP47-205ENST00000525257 ALDH2P05091 517 aa26.76■■□□□ 1.87
USP47-205ENST00000525257 OTOP3Q7RTS5 596 aa26.76■■□□□ 1.87
USP47-205ENST00000525257 NEK8Q86SG6 692 aa26.76■■□□□ 1.87
USP47-205ENST00000525257 EXOC8Q8IYI6 725 aa26.76■■□□□ 1.87
USP47-205ENST00000525257 MRPL17Q9NRX2 175 aaKnown RBP26.76■■□□□ 1.87
USP47-205ENST00000525257 KANSL3Q9P2N6 904 aa26.76■■□□□ 1.87
USP47-205ENST00000525257 PPME1Q9Y570 386 aa26.76■■□□□ 1.87
USP47-205ENST00000525257 CCNT1O60563 726 aaKnown RBP26.75■■□□□ 1.87
USP47-205ENST00000525257 LILRB3O75022 631 aa26.75■■□□□ 1.87
USP47-205ENST00000525257 YWHABP31946 246 aaKnown RBP26.75■■□□□ 1.87
USP47-205ENST00000525257 EMC2Q15006 297 aa26.75■■□□□ 1.87
USP47-205ENST00000525257 PPP4R3AQ6IN85 833 aa26.75■■□□□ 1.87
USP47-205ENST00000525257 RNF149Q8NC42 400 aa26.75■■□□□ 1.87
USP47-205ENST00000525257 FLCNQ8NFG4 579 aa26.75■■□□□ 1.87
USP47-205ENST00000525257 PHF20Q9BVI0 1012 aa26.75■■□□□ 1.87
USP47-205ENST00000525257 RGL1Q9NZL6 768 aa26.75■■□□□ 1.87
USP47-205ENST00000525257 PRG3Q9Y2Y8 225 aaPredicted RBP26.75■■□□□ 1.87
USP47-205ENST00000525257 MARCH6O60337 910 aa26.74■■□□□ 1.87
USP47-205ENST00000525257 GCFC2P16383 781 aaKnown RBP26.74■■□□□ 1.87
USP47-205ENST00000525257 NCLP19338 710 aaKnown RBP26.74■■□□□ 1.87
USP47-205ENST00000525257 NCAPH2Q6IBW4 605 aa26.74■■□□□ 1.87
USP47-205ENST00000525257 C4orf19Q8IY42 314 aa26.74■■□□□ 1.87
USP47-205ENST00000525257 HAS1Q92839 578 aa26.74■■□□□ 1.87
USP47-205ENST00000525257 MARCH5Q9NX47 278 aa26.74■■□□□ 1.87
USP47-205ENST00000525257 VPS13AQ96RL7 3174 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 PROB1E7EW31 1015 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 DTNBO60941 627 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 ERLIN2O94905 339 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 SOD2P04179 222 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 URODP06132 367 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 ITGA4P13612 1032 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 AK2P54819 239 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 EPHA7Q15375 998 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 XKR9Q5GH70 373 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 PIK3AP1Q6ZUJ8 805 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 ASCL5Q7RTU5 278 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 FERMT3Q86UX7 667 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 POTEDQ86YR6 584 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 SMG8Q8ND04 991 aaKnown RBP26.73■■□□□ 1.87
USP47-205ENST00000525257 TCP11Q8WWU5 503 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 DYDC2Q96IM9 177 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 MAN1C1Q9NR34 630 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 GJB4Q9NTQ9 266 aa26.73■■□□□ 1.87
USP47-205ENST00000525257 ZBTB39O15060 712 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 OR1G1P47890 313 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 CLCN5P51795 746 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 CYP4A11Q02928 519 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 TDGQ13569 410 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 CTTNQ14247 550 aaKnown RBP26.72■■□□□ 1.87
USP47-205ENST00000525257 CWF19L1Q69YN2 538 aaKnown RBP26.72■■□□□ 1.87
USP47-205ENST00000525257 C15orf39Q6ZRI6 1047 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 OTUD6AQ7L8S5 288 aa26.72■■□□□ 1.87
USP47-205ENST00000525257 TAS1R1Q7RTX1 841 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms