RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 GAS2L3Q86XJ1 694 aa17.38■□□□□ 0.37
TSPAN4-213ENST00000524895 RNF214Q8ND24 703 aa17.38■□□□□ 0.37
TSPAN4-213ENST00000524895 GOLGA5Q8TBA6 731 aa17.38■□□□□ 0.37
TSPAN4-213ENST00000524895 MRPL4Q9BYD3 311 aaKnown RBP17.38■□□□□ 0.37
TSPAN4-213ENST00000524895 MINDY3Q9H8M7 445 aa17.38■□□□□ 0.37
TSPAN4-213ENST00000524895 ATP11BQ9Y2G3 1177 aa17.38■□□□□ 0.37
TSPAN4-213ENST00000524895 SMTNL1A8MU46 457 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 CSDE1O75534 798 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 ERLIN2O94905 339 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 SFPQP23246 707 aaKnown RBP eCLIP17.37■□□□□ 0.372e-6■■■■□ 23.9
TSPAN4-213ENST00000524895 EIF4BP23588 611 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 LIG4P49917 911 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 PMS1P54277 932 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 TLE2Q04725 743 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 BFSP2Q13515 415 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 PRPF4BQ13523 1007 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 TMEM132AQ24JP5 1023 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 ZCWPW2Q504Y3 356 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 ANKRD40Q6AI12 368 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 TTI2Q6NXR4 508 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 CAGE1Q8TC20 777 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 ENOX1Q8TC92 643 aaKnown RBP17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 PRIMPOLQ96LW4 560 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 TOX2Q96NM4 488 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 IKZF4Q9H2S9 585 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 FZD8Q9H461 694 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 CDHR5Q9HBB8 845 aa17.37■□□□□ 0.37
TSPAN4-213ENST00000524895 GOLGA6L19H0YKK7 550 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 ACKR2O00590 384 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 IKBKBO14920 756 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 TGFB1I1O43294 461 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 CKBP12277 381 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 SNRPFP62306 86 aaKnown RBP17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 MGAT3Q09327 533 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 IQCB1Q15051 598 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 PCBP1Q15365 356 aaKnown RBP eCLIP17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 FAM187BQ17R55 369 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 EDRF1Q3B7T1 1238 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 SPATA1Q5VX52 437 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 FOXR2Q6PJQ5 311 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 CATSPER4Q7RTX7 472 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 LUZP1Q86V48 1076 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 DHX40Q8IX18 779 aaKnown RBP17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 MED15Q96RN5 788 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 AGPAT3Q9NRZ7 376 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 CGNQ9P2M7 1197 aaKnown RBP17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 TRAF3IP3Q9Y228 551 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 NFE2L3Q9Y4A8 694 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 CNTNAP2Q9UHC6 1331 aa17.36■□□□□ 0.37
TSPAN4-213ENST00000524895 PIGRP01833 764 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 CHRNA1P02708 482 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 EDN1P05305 212 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 IQCF3P0C7M6 154 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 TPM4P67936 248 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 RBL2Q08999 1139 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 NCBP1Q09161 790 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 LRRC26Q2I0M4 334 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 FAM26DQ5JW98 314 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 ZNF618Q5T7W0 954 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 COL13A1Q5TAT6 717 aaPredicted RBP17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 ZPBP2Q6X784 338 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 CSGALNACT2Q8N6G5 542 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 TMEM40Q8WWA1 233 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 TARS2Q9BW92 718 aaKnown RBP17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 RBSNQ9H1K0 784 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 USP20Q9Y2K6 914 aa17.35■□□□□ 0.37
TSPAN4-213ENST00000524895 DNAH12Q6ZR08 3092 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 TISP43B9A030 160 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 CLIC2O15247 247 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 B4GALT5O43286 388 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 TSPAN1O60635 241 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 NR3C1P04150 777 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 SELPP16109 830 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 FGFR4P22455 802 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 NR2F2P24468 414 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 RPL13P26373 211 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 MATR3P43243 847 aaKnown RBP eCLIP17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 FAAP100Q0VG06 881 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 AMHR2Q16671 573 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 ATF7IP2Q5U623 682 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 ARMCX5Q6P1M9 558 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 LRRC8DQ7L1W4 858 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 ABHD8Q96I13 439 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 DUSP9Q99956 384 aaKnown RBP17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 ANKFY1Q9P2R3 1169 aa17.34■□□□□ 0.37
TSPAN4-213ENST00000524895 KIAA0100Q14667 2235 aaKnown RBP17.33■□□□□ 0.37
TSPAN4-213ENST00000524895 ANKRD63C9JTQ0 380 aa17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 PITPNM1O00562 1244 aa17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 RPS6KA5O75582 802 aa17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 TOM1L1O75674 476 aa17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 FGFR1OPO95684 399 aaKnown RBP17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 CLTBP09497 229 aa17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 CYP2J2P51589 502 aa17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 FKBP3Q00688 224 aaKnown RBP17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 NCAPHQ15003 741 aa17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 NFIL3Q16649 462 aa17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 SLFN12LQ6IEE8 588 aa17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 SLC39A4Q6P5W5 647 aa17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 TSHZ1Q6ZSZ6 1077 aa17.33■□□□□ 0.36
TSPAN4-213ENST00000524895 UBE2Q1Q7Z7E8 422 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms