RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 LARSQ9P2J5 1176 aaKnown RBP8.97□□□□□ -0.97
CHD7-202ENST00000524602 IGSF9BQ9UPX0 1349 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 C5orf60A6NFR6 353 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 PHF2O75151 1096 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 VCAM1P19320 739 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 MAPK7Q13164 816 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 PHLDB3Q6NSJ2 640 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 C6orf89Q6UWU4 347 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 DEFB132Q7Z7B7 95 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 TLCD1Q96CP7 247 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 CYFIP2Q96F07 1278 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 CENPHQ9H3R5 247 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 ST6GALNAC4Q9H4F1 302 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 RABEP2Q9H5N1 569 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 BCAS3Q9H6U6 928 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.97□□□□□ -0.97
CHD7-202ENST00000524602 ZDHHC18Q9NUE0 388 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 PCYOX1Q9UHG3 505 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 DBR1Q9UK59 544 aaKnown RBP8.97□□□□□ -0.97
CHD7-202ENST00000524602 PCNTO95613 3336 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 ZNF536O15090 1300 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 YDJCA8MPS7 323 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 HIP1RO75146 1068 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 TRIM49P0CI25 452 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 TRIM49CP0CI26 452 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 GZMAP12544 262 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 ABCB4P21439 1286 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 FLT3P36888 993 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 GPC5P78333 572 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 JAG1P78504 1218 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 IFFO1Q0D2I5 559 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 BYSLQ13895 437 aaKnown RBP8.97□□□□□ -0.97
CHD7-202ENST00000524602 TNIP1Q15025 636 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 KIAA1755Q5JYT7 1200 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 ARHGEF26Q96DR7 871 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 ACCSQ96QU6 501 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 IWS1Q96ST2 819 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 CELF4Q9BZC1 486 aaKnown RBP8.97□□□□□ -0.97
CHD7-202ENST00000524602 WNT8AQ9H1J5 351 aa8.97□□□□□ -0.97
CHD7-202ENST00000524602 ACTR5Q9H9F9 607 aaPredicted RBP8.97□□□□□ -0.97
CHD7-202ENST00000524602 FOXN3O00409 490 aaPredicted RBP8.96□□□□□ -0.97
CHD7-202ENST00000524602 IPO5O00410 1097 aaKnown RBP8.96□□□□□ -0.97
CHD7-202ENST00000524602 PPIP5K2O43314 1243 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 RTN2O75298 545 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 FNTAP49354 379 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 VAMP7P51809 220 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 PTPROQ16827 1216 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 KRT71Q3SY84 523 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 EPC2Q52LR7 807 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 TAX1BP1Q86VP1 789 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 OR2W6PQ8NHA6 318 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 PGM2Q96G03 612 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 CEP89Q96ST8 783 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 NCAPGQ9BPX3 1015 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 MXRA8Q9BRK3 442 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 PABPC3Q9H361 631 aaKnown RBP8.96□□□□□ -0.97
CHD7-202ENST00000524602 TDRD3Q9H7E2 651 aaKnown RBP8.96□□□□□ -0.97
CHD7-202ENST00000524602 TMOD2Q9NZR1 351 aa8.96□□□□□ -0.97
CHD7-202ENST00000524602 CNOT7Q9UIV1 285 aaKnown RBP8.96□□□□□ -0.97
CHD7-202ENST00000524602 CCDC169A6NNP5 214 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 K7ENM7 598 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 P4HBP07237 508 aaKnown RBP8.96□□□□□ -0.98
CHD7-202ENST00000524602 CTNNA2P26232 953 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 SEC24CP53992 1094 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 JAMLQ86YT9 394 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 SPICE1Q8N0Z3 855 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 ZSWIM1Q9BR11 485 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 DPH5Q9H2P9 285 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 WRAP73Q9P2S5 460 aaPredicted RBP8.96□□□□□ -0.98
CHD7-202ENST00000524602 FEM1BQ9UK73 627 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 NOVA2Q9UNW9 492 aaKnown RBP8.96□□□□□ -0.98
CHD7-202ENST00000524602 COG5Q9UP83 839 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 ALG6Q9Y672 507 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 SMCHD1A6NHR9 2005 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 ZBTB39O15060 712 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 LYPLA2O95372 231 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 PMS2P54278 862 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 PRPF4BQ13523 1007 aaKnown RBP8.96□□□□□ -0.98
CHD7-202ENST00000524602 RRP1BQ14684 758 aaKnown RBP8.96□□□□□ -0.98
CHD7-202ENST00000524602 ARHGAP44Q17R89 818 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 PADI6Q6TGC4 694 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 DAW1Q8N136 415 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 HOOK2Q96ED9 719 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 TRIM51Q9BSJ1 452 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 TMEM109Q9BVC6 243 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 STMN4Q9H169 189 aaPredicted RBP8.96□□□□□ -0.98
CHD7-202ENST00000524602 VCPKMTQ9H867 229 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 POLD4Q9HCU8 107 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 UBE2TQ9NPD8 197 aaPredicted RBP8.96□□□□□ -0.98
CHD7-202ENST00000524602 PPANQ9NQ55 473 aaKnown RBP8.96□□□□□ -0.98
CHD7-202ENST00000524602 SEPT11Q9NVA2 429 aaKnown RBP8.96□□□□□ -0.98
CHD7-202ENST00000524602 CTTNBP2NLQ9P2B4 639 aa8.96□□□□□ -0.98
CHD7-202ENST00000524602 MTRF1LQ9UGC7 380 aaKnown RBP8.96□□□□□ -0.98
CHD7-202ENST00000524602 EMSYQ7Z589 1322 aa8.95□□□□□ -0.98
CHD7-202ENST00000524602 KIAA0391O15091 583 aaKnown RBP8.95□□□□□ -0.98
CHD7-202ENST00000524602 FTLP02792 175 aaPredicted RBP8.95□□□□□ -0.98
CHD7-202ENST00000524602 PLS3P13797 630 aa8.95□□□□□ -0.98
CHD7-202ENST00000524602 HSD17B4P51659 736 aa8.95□□□□□ -0.98
CHD7-202ENST00000524602 MAGOHP61326 146 aaKnown RBP8.95□□□□□ -0.98
CHD7-202ENST00000524602 ACTN3Q08043 901 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms