RNA–Protein interactions for RNA: ENST00000524292.5

CTNNA1-242, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-242ENST00000524292 LTBRP36941 435 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 POLGP54098 1239 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 KRT17Q04695 432 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 ZP2Q05996 745 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 ADAM15Q13444 863 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 SMAD2Q15796 467 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 TWF2Q6IBS0 349 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 ADGRD2Q7Z7M1 963 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 RBM23Q86U06 439 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 RHPN2Q8IUC4 686 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 GTF3C6Q969F1 213 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 NLRP4Q96MN2 994 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 CASD1Q96PB1 797 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 CD320Q9NPF0 282 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 ENTPD7Q9NQZ7 604 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 CYP26B1Q9NR63 512 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 VAV3Q9UKW4 847 aa9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 PIN4Q9Y237 131 aaKnown RBP9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 FNDC1Q4ZHG4 1894 aaPredicted RBP9.51□□□□□ -0.89
CTNNA1-242ENST00000524292 ATG2AQ2TAZ0 1938 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 A0A087WZ62 844 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 EML1O00423 815 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 MBTPS2O43462 519 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 DCXO43602 365 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 GPR37L1O60883 481 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 STBD1O95210 358 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 CTDNEP1O95476 244 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 RFC5P40937 340 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 RAB27AP51159 221 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 PLCB3Q01970 1234 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 DLX2Q07687 328 aaPredicted RBP9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 DRP2Q13474 957 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 BMS1Q14692 1282 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 EPHA7Q15375 998 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 CLLU1OSQ5K130 101 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 PLA2G4FQ68DD2 849 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 NCAPH2Q6IBW4 605 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 KCNT2Q6UVM3 1135 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 ANO5Q75V66 913 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 OTUD6AQ7L8S5 288 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 CATSPER4Q7RTX7 472 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 NECAB1Q8N987 351 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 SMRP1Q8NCR6 262 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 PSPC1Q8WXF1 523 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 MRPS27Q92552 414 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 CEP170P1Q96L14 293 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 CCDC43Q96MW1 224 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 CEP89Q96ST8 783 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 TCF25Q9BQ70 676 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 SH2D3AQ9BRG2 576 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 FDXACB1Q9BRP7 624 aaPredicted RBP9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 LXNQ9BS40 222 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 LRFN3Q9BTN0 628 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 SLC6A16Q9GZN6 736 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 CWH43Q9H720 699 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 ZSWIM4Q9H7M6 989 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 NGRNQ9NPE2 291 aaKnown RBP9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 GJB4Q9NTQ9 266 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 SPG21Q9NZD8 308 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 COL4A3BPQ9Y5P4 624 aa9.5□□□□□ -0.89
CTNNA1-242ENST00000524292 FAM86C2PA6NEL3 165 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 NEMFO60524 1076 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 CSDE1O75534 798 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 EYA4O95677 639 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 YWHABP31946 246 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 PHKA2P46019 1235 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 ALDH7A1P49419 539 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 NEK4P51957 841 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 COASYQ13057 564 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 NR5A1Q13285 461 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 CALCRLQ16602 461 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 ME3Q16798 604 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 DUSP6Q16828 381 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 PLPP4Q5VZY2 271 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 BRICD5Q6PL45 260 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 GLB1LQ6UWU2 654 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 TMC7Q7Z402 723 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 ZNF598Q86UK7 904 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 C4orf19Q8IY42 314 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 HELQQ8TDG4 1101 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 TCP11Q8WWU5 503 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 HAS1Q92839 578 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 MSLNLQ96KJ4 702 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 TRAIPQ9BWF2 469 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 RNF19AQ9NV58 838 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 BARX2Q9UMQ3 279 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 PCDHGC5Q9Y5F6 944 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 PLXNA4Q9HCM2 1894 aa9.49□□□□□ -0.89
CTNNA1-242ENST00000524292 PRR33A8MZF0 331 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 RNF223E7ERA6 249 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 FSCN2O14926 492 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 PER2O15055 1255 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 ASAP2O43150 1006 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 ZC3H11AO75152 810 aaKnown RBP eCLIP9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 GLP2RO95838 553 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 ATF7P17544 494 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 PBX3P40426 434 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 NPEPPSP55786 919 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 ERVFC1P60507 584 aa9.48□□□□□ -0.89
CTNNA1-242ENST00000524292 CYP4A11Q02928 519 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms