RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-222	ENST00000524006	OAT	P04181	439 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	RHOXF2B	P0C7M4	288 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	LIG4	P49917	911 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	GTF2B	Q00403	316 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	AMPD2	Q01433	879 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	NEDD9	Q14511	834 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	KCTD2	Q14681	263 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	EMC2	Q15006	297 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	PAPD7	Q5XG87	772 aa	Known RBP	11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	HGSNAT	Q68CP4	663 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	KCNV1	Q6PIU1	500 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	LBX2	Q6XYB7	198 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	PRRT2	Q7Z6L0	340 aa	Predicted RBP	11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	CTU1	Q7Z7A3	348 aa	Known RBP	11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	REM2	Q8IYK8	340 aa	Predicted RBP	11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	SPIRE2	Q8WWL2	714 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	SLC7A3	Q8WY07	619 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	POMGNT1	Q8WZA1	660 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	RHOXF2	Q9BQY4	288 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	SH2D3A	Q9BRG2	576 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	STK33	Q9BYT3	514 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	AZI2	Q9H6S1	392 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	GPRC5C	Q9NQ84	441 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	CYP26B1	Q9NR63	512 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	DMAC2	Q9NW81	257 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	DNAJC12	Q9UKB3	198 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	TBX20	Q9UMR3	447 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	AGTPBP1	Q9UPW5	1226 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	EVPL	Q92817	2033 aa		11.69	□□□□□ -0.54
SPIDR-222	ENST00000524006	CCDC151	A5D8V7	595 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	SPDYE5	A6NIY4	337 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006		F8VZ95	297 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	NOP56	O00567	594 aa	Known RBP	11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	ZNF263	O14978	683 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	BUB1	O43683	1085 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	ABL1	P00519	1130 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	H2AFZ	P0C0S5	128 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	TNFAIP3	P21580	790 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	ICAM3	P32942	547 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	RFC5	P40937	340 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	PRKCI	P41743	596 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	NPTX2	P47972	431 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	RTP1	P59025	263 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	APBA1	Q02410	837 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	PTK2	Q05397	1052 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	DRAP1	Q14919	205 aa	Predicted RBP	11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	ARHGAP44	Q17R89	818 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	H2AFV	Q71UI9	128 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	CYFIP1	Q7L576	1253 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	MAP4K3	Q8IVH8	894 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	SYCE1	Q8N0S2	351 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	U2AF1L4	Q8WU68	220 aa	Known RBP	11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	FIZ1	Q96SL8	496 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	MMP19	Q99542	508 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	NRBP2	Q9NSY0	501 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	HDAC6	Q9UBN7	1215 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	ADAMTS1	Q9UHI8	967 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	SNX12	Q9UMY4	172 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006	CAPN6	Q9Y6Q1	641 aa		11.68	□□□□□ -0.54
SPIDR-222	ENST00000524006		A0A087X0T9	212 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	RCCD1	A6NED2	376 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	LRRIQ4	A6NIV6	560 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	KIAA0391	O15091	583 aa	Known RBP	11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	ATP8B1	O43520	1251 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	TLR2	O60603	784 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	TBC1D8	O95759	1140 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	FAM228B	P0C875	321 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	USP8	P40818	1118 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	JAM2	P57087	298 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	CNTN2	Q02246	1040 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	NAB2	Q15742	525 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	SNRNP35	Q16560	246 aa	Known RBP	11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	ASTE1	Q2TB18	679 aa	Predicted RBP	11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	ANO5	Q75V66	913 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	EXOC8	Q8IYI6	725 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	ANKRD13C	Q8N6S4	541 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	FAM81B	Q96LP2	452 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	CBWD1	Q9BRT8	395 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	STRA6	Q9BX79	667 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	PARD6B	Q9BYG5	372 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	ASCC2	Q9H1I8	757 aa	Predicted RBP	11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	IKZF4	Q9H2S9	585 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	BCAS3	Q9H6U6	928 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	KIAA1586	Q9HCI6	787 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	SIX2	Q9NPC8	291 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	DDX41	Q9UJV9	622 aa	Known RBP	11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	INTU	Q9ULD6	942 aa		11.67	□□□□□ -0.54
SPIDR-222	ENST00000524006	GOLGA8IP	A6NC78	632 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	SPDYE4	A6NLX3	237 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	GOLGA8J	A6NMD2	632 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	BTNL10	A8MVZ5	291 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	EVI5	O60447	810 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	LRRN2	O75325	713 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	PALM	O75781	387 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	PRLR	P16471	622 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	GART	P22102	1010 aa		11.66	□□□□□ -0.54
SPIDR-222	ENST00000524006	UBA1	P22314	1058 aa	Known RBP	11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms