RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 PRKD2Q9BZL6 878 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 DENND2DQ9H6A0 471 aaPredicted RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 XKR8Q9H6D3 395 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 FANCEQ9HB96 536 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 RRN3Q9NYV6 651 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 RTEL1Q9NZ71 1219 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 EHD3Q9NZN3 535 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 HMGXB4Q9UGU5 601 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 CHORDC1Q9UHD1 332 aaPredicted RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 MOSPD1Q9UJG1 213 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 BAG5Q9UL15 447 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 CNOT6Q9ULM6 557 aaKnown RBP7.03□□□□□ -1.28
SDC2-208ENST00000523877 PHTF1Q9UMS5 762 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 FAM50BQ9Y247 325 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 NDUFB9Q9Y6M9 179 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 MTUS2Q5JR59 1369 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 USP31Q70CQ4 1352 aa7.03□□□□□ -1.28
SDC2-208ENST00000523877 KIF7Q2M1P5 1343 aa7.02□□□□□ -1.28
SDC2-208ENST00000523877 SOGA1O94964 1423 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 H7C0S8 307 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 GOLGA8RI6L899 631 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 CAPN9O14815 690 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 AREL1O15033 823 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 KPNA5O15131 536 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 KMOO15229 486 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 TXNL1O43396 289 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 RNF40O75150 1001 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 ALDH1A2O94788 518 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 FAM13AO94988 1023 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 LUC7L3O95232 432 aaKnown RBP7.02□□□□□ -1.29
SDC2-208ENST00000523877 GOSR1O95249 250 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 POLR2MP0CAP2 368 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 CTRB1P17538 263 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 NFKBIAP25963 317 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 IDUAP35475 653 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 CD97P48960 835 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 S100A12P80511 92 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 GSTM4Q03013 218 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 KDSRQ06136 332 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 COTL1Q14019 142 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 MOGQ16653 247 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 MMEL1Q495T6 779 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 SLC44A4Q53GD3 710 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 TDRD12Q587J7 1177 aaKnown RBP7.02□□□□□ -1.29
SDC2-208ENST00000523877 CYP4A22Q5TCH4 519 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 THEMIS2Q5TEJ8 643 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 FBXW10Q5XX13 1052 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 CTRB2Q6GPI1 263 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 ARHGAP11AQ6P4F7 1023 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 BORAQ6PGQ7 559 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 C6orf89Q6UWU4 347 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 ANKS3Q6ZW76 656 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 RAB11FIP2Q7L804 512 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 KRT28Q7Z3Y7 464 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 FAM83AQ86UY5 434 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 VPS36Q86VN1 386 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 COMTD1Q86VU5 262 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 TRIM50Q86XT4 487 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 CD302Q8IX05 232 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 ZNF565Q8N9K5 539 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 CCDC112Q8NEF3 446 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 AGR3Q8TD06 166 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 BCAS4Q8TDM0 211 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 RNF139Q8WU17 664 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 NLRP7Q8WX94 980 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 TUBGCP3Q96CW5 907 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 PGBD1Q96JS3 809 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 PIGSQ96S52 555 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 SECISBP2Q96T21 854 aaKnown RBP7.02□□□□□ -1.29
SDC2-208ENST00000523877 DNAJC7Q99615 494 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 SMAD5Q99717 465 aaKnown RBP7.02□□□□□ -1.29
SDC2-208ENST00000523877 RHOBTB2Q9BYZ6 727 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 LIN28AQ9H9Z2 209 aaKnown RBP7.02□□□□□ -1.29
SDC2-208ENST00000523877 ZFYVE28Q9HCC9 887 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 CRNNQ9UBG3 495 aaPredicted RBP7.02□□□□□ -1.29
SDC2-208ENST00000523877 FBXO40Q9UH90 709 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 CHMP2BQ9UQN3 213 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 NUDCQ9Y266 331 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 ZBTB1Q9Y2K1 713 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 AP1M2Q9Y6Q5 423 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 SBNO1A3KN83 1393 aa7.02□□□□□ -1.29
SDC2-208ENST00000523877 PTPRCP08575 1304 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 GRIN2AQ12879 1464 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 NSD2O96028 1365 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 ZMYM3Q14202 1370 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CCNB3Q8WWL7 1395 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 A0A0B4J269 797 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 C1orf232A0A0U1RR37 186 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 LOC100653049A0A140TA62 436 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 LOC105371267A0A1B0GV96 52 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 GOLGA8IPA6NC78 632 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 GOLGA8JA6NMD2 632 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 OR5K4A6NMS3 321 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 GOLGA8BA8MQT2 603 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 GOLGA8TH3BQL2 631 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 SPTLC1O15269 473 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 PDPK1O15530 556 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 CTNND1O60716 968 aaKnown RBP7.01□□□□□ -1.29
SDC2-208ENST00000523877 PFDN1O60925 122 aa7.01□□□□□ -1.29
SDC2-208ENST00000523877 FLOT1O75955 427 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms