RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 K7ELQ4 463 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 WDR46O15213 610 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 CYP26A1O43174 497 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 SLC25A27O95847 323 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 CHGBP05060 677 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 ZNF865P0CJ78 1059 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 STAT3P40763 770 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 EPHB4P54760 987 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 SMAD3P84022 425 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 FPGSQ05932 587 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 SNX17Q15036 470 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 TCEAL1Q15170 157 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 FAM83BQ5T0W9 1011 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 TMED8Q6PL24 325 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 SIAH1Q8IUQ4 282 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 ABRAQ8N0Z2 381 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 PIWIL2Q8TC59 973 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 PPM1EQ8WY54 764 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 Q96M66 194 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 SRPK1Q96SB4 655 aaKnown RBP6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 NUP88Q99567 741 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 MKNK2Q9HBH9 465 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 LRRC4CQ9HCJ2 640 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 STARD7Q9NQZ5 370 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 PAG1Q9NWQ8 432 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 FBXL21Q9UKT6 434 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 ZHX1Q9UKY1 873 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 CNPY2Q9Y2B0 182 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 MSRB2Q9Y3D2 182 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 CTDP1Q9Y5B0 961 aaPredicted RBP6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 SLC4A4Q9Y6R1 1079 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 FOCADQ5VW36 1801 aa6.26□□□□□ -1.41
CTNNA1-239ENST00000523685 PRR19A6NJB7 356 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 RBAK-RBAKDNI3L0D1 243 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 VWA5AO00534 786 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 AKR1A1P14550 325 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 ADD2P35612 726 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 OXCT1P55809 520 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 BMS1Q14692 1282 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 ZNF792Q3KQV3 632 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 PRSS36Q5K4E3 855 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 C12orf60Q5U649 245 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 HEATR6Q6AI08 1181 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 SNRNP48Q6IEG0 339 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 CCDC129Q6ZRS4 1044 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 EEPD1Q7L9B9 569 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 RIOX2Q8IUF8 465 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 CPXCR1Q8N123 301 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 MFSD4AQ8N468 514 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 FAM181AQ8N9Y4 354 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 DTWD2Q8NBA8 298 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 KIF1BPQ96EK5 621 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 DDX11Q96FC9 970 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 CCDC17Q96LX7 622 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 DEPDC7Q96QD5 511 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 HAUS7Q99871 368 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.25□□□□□ -1.413e-7■□□□□ 10.9
CTNNA1-239ENST00000523685 KANSL2Q9H9L4 492 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 ATP8A2Q9NTI2 1148 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 ISY1Q9ULR0 285 aaKnown RBP6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 CAPN6Q9Y6Q1 641 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 UNC80Q8N2C7 3258 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 FRMPD3Q5JV73 1810 aa6.25□□□□□ -1.41
CTNNA1-239ENST00000523685 NAV1Q8NEY1 1877 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 MYADML2A6NDP7 307 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 GRXCR1A8MXD5 290 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 KIAA0355O15063 1070 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 PDPK1O15530 556 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 HMMRO75330 724 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 FOSL1P15407 271 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 CD247P20963 164 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 ZNF143P52747 638 aaPredicted RBP6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 ACLYP53396 1101 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 TNK2Q07912 1038 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 KCNA10Q16322 511 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 MRM1Q6IN84 353 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 CTR9Q6PD62 1173 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 C16orf86Q6ZW13 317 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 USP38Q8NB14 1042 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 NUP133Q8WUM0 1156 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 CHMP4CQ96CF2 233 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 TIFAQ96CG3 184 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 MRFAP1L1Q96HT8 127 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 SLF1Q9BQI6 1058 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 PRDM14Q9GZV8 571 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 RAVER2Q9HCJ3 691 aaKnown RBP6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 SNTG2Q9NY99 539 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 NRBP1Q9UHY1 535 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 FAM184BQ9ULE4 1060 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 ZNF451Q9Y4E5 1061 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 PCDHB12Q9Y5F1 795 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 SYNRGQ9UMZ2 1314 aa6.24□□□□□ -1.41
CTNNA1-239ENST00000523685 LTBP2Q14767 1821 aa6.23□□□□□ -1.41
CTNNA1-239ENST00000523685 ANKRD34BA5PLL1 514 aa6.23□□□□□ -1.41
CTNNA1-239ENST00000523685 FAM221BA6H8Z2 402 aa6.23□□□□□ -1.41
CTNNA1-239ENST00000523685 SMARCA5O60264 1052 aaPredicted RBP6.23□□□□□ -1.41
CTNNA1-239ENST00000523685 ZBED4O75132 1171 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms