RNA–Protein interactions for RNA: ENST00000523339.1

NPM1-210, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 268 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-210ENST00000523339 TSPY2A6NKD2 308 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 TBKBP1A7MCY6 615 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 H3BRB1 525 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 RBAK-RBAKDNI3L0D1 243 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 ENPP3O14638 875 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 TREHO43280 583 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 DHX16O60231 1041 aaKnown RBP4.42□□□□□ -1.7
NPM1-210ENST00000523339 PPFIA4O75335 1185 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 DGKIO75912 1065 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 EOMESO95936 686 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 PROS1P07225 676 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 IFIT2P09913 472 aaKnown RBP4.42□□□□□ -1.7
NPM1-210ENST00000523339 SMIM10L2AP0DMW4 78 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 SMIM10L2BP0DMW5 78 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 MYCLP12524 364 aaPredicted RBP4.42□□□□□ -1.7
NPM1-210ENST00000523339 SCG2P13521 617 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 NPR3P17342 541 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 SSTR4P31391 388 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 SLC16A2P36021 539 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 MAP1BP46821 2468 aaKnown RBP4.42□□□□□ -1.7
NPM1-210ENST00000523339 ARHGAP1Q07960 439 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 MTX1Q13505 466 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 CAMK1Q14012 370 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 PPP2R5DQ14738 602 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 LPAL2Q16609 132 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 ALDH1L2Q3SY69 923 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 USH1GQ495M9 461 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 AASDHQ4L235 1098 aaPredicted RBP4.42□□□□□ -1.7
NPM1-210ENST00000523339 FAM26DQ5JW98 314 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 RCSD1Q6JBY9 416 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 SYCE2Q6PIF2 218 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 ELMSAN1Q6PJG2 1045 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 UNQ6494/PRO21346Q6UXR6 183 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 PRR23BQ6ZRT6 265 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 CABP7Q86V35 215 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 WFDC8Q8IUA0 241 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 ERC1Q8IUD2 1116 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 NPAS4Q8IUM7 802 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 ABI1Q8IZP0 508 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 VN1R2Q8NFZ6 395 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 PPTC7Q8NI37 304 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 NSUN6Q8TEA1 469 aaKnown RBP4.42□□□□□ -1.7
NPM1-210ENST00000523339 ATP8B4Q8TF62 1192 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 CLUAP1Q96AJ1 413 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 BORCS6Q96GS4 357 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 SHDQ96IW2 340 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 CTAGE1Q96RT6 745 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 UBL7Q96S82 380 aaPredicted RBP4.42□□□□□ -1.7
NPM1-210ENST00000523339 FTHL17Q9BXU8 183 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 NACAP1Q9BZK3 213 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 TANC1Q9C0D5 1861 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 S1PR5Q9H228 398 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 TUT1Q9H6E5 874 aaKnown RBP4.42□□□□□ -1.7
NPM1-210ENST00000523339 TOMM22Q9NS69 142 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 SETD4Q9NVD3 440 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 FRRS1LQ9P0K9 344 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 CDH22Q9UJ99 828 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 ZNF215Q9UL58 517 aaPredicted RBP4.42□□□□□ -1.7
NPM1-210ENST00000523339 DUSP12Q9UNI6 340 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 USTQ9Y2C2 406 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 PCDHGA2Q9Y5H1 932 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 MAFBQ9Y5Q3 323 aaPredicted RBP4.42□□□□□ -1.7
NPM1-210ENST00000523339 SPTBN2O15020 2390 aa4.42□□□□□ -1.7
NPM1-210ENST00000523339 MYO5AQ9Y4I1 1855 aaKnown RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 CEP250Q9BV73 2442 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 MYH1P12882 1939 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 DENND3A2RUS2 1198 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 SLC30A4O14863 429 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 TM4SF5O14894 197 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 TBC1D4O60343 1298 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 EIF3JO75822 258 aaKnown RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 GGPS1O95749 300 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 CENPBP07199 599 aaPredicted RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 LAG3P18627 525 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 EIF2AK2P19525 551 aaKnown RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 ERVFC1P60507 584 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 TFAP4Q01664 338 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 SP4Q02446 784 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 PAK2Q13177 524 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 SMC1AQ14683 1233 aaKnown RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 UBXN2BQ14CS0 331 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 SETDB1Q15047 1291 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 UTP14CQ5TAP6 766 aaKnown RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 SYDE2Q5VT97 1194 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 KCNV1Q6PIU1 500 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 DCLRE1AQ6PJP8 1040 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 LRSAM1Q6UWE0 723 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 TMC5Q6UXY8 1006 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 MCF2L2Q86YR7 1114 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 SIRT2Q8IXJ6 389 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 CLASRPQ8N2M8 674 aaKnown RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 AGGF1Q8N302 714 aaeCLIP4.41□□□□□ -1.7
NPM1-210ENST00000523339 DTWD1Q8N5C7 304 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 TMEM57Q8N5G2 664 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 C12orf76Q8N812 135 aaPredicted RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 C12orf50Q8NA57 414 aaPredicted RBP4.41□□□□□ -1.7
NPM1-210ENST00000523339 SUMF1Q8NBK3 374 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 STAMQ92783 540 aa4.41□□□□□ -1.7
NPM1-210ENST00000523339 FRAT1Q92837 279 aaPredicted RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms