RNA–Protein interactions for RNA: ENST00000523068.1

PVT1-216, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 844 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-216ENST00000523068 MINDY3Q9H8M7 445 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 UBN1Q9NPG3 1134 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 KANSL3Q9P2N6 904 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 DAXXQ9UER7 740 aaPredicted RBP12.11□□□□□ -0.47
PVT1-216ENST00000523068 DBR1Q9UK59 544 aaKnown RBP12.11□□□□□ -0.47
PVT1-216ENST00000523068 STK24Q9Y6E0 443 aa12.11□□□□□ -0.47
PVT1-216ENST00000523068 INO80B-WBP1J3KQ70 363 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 ZC3H11AO75152 810 aaKnown RBP eCLIP12.1□□□□□ -0.47
PVT1-216ENST00000523068 OFD1O75665 1012 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 EYA4O95677 639 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 SPATA31C1P0DKV0 1188 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 U2AF2P26368 475 aaKnown RBP eCLIP12.1□□□□□ -0.472e-7■■□□□ 11.9
PVT1-216ENST00000523068 HOXA11P31270 313 aaPredicted RBP12.1□□□□□ -0.47
PVT1-216ENST00000523068 ARL2P36404 184 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 PBX3P40426 434 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 COASYQ13057 564 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 SMC1AQ14683 1233 aaKnown RBP12.1□□□□□ -0.47
PVT1-216ENST00000523068 DUSP6Q16828 381 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 LONRF3Q496Y0 759 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 MRPL10Q7Z7H8 261 aaKnown RBP12.1□□□□□ -0.47
PVT1-216ENST00000523068 SLC39A11Q8N1S5 342 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 RAB34Q9BZG1 259 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 POLR3FQ9H1D9 316 aaPredicted RBP12.1□□□□□ -0.47
PVT1-216ENST00000523068 RSAD1Q9HA92 442 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 TBC1D13Q9NVG8 400 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 STK39Q9UEW8 545 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 INPP5FQ9Y2H2 1132 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 PCDHGC5Q9Y5F6 944 aa12.1□□□□□ -0.47
PVT1-216ENST00000523068 PI4K2BG5E9Z4 385 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 LAD1O00515 517 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 PER2O15055 1255 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 TSPAN1O60635 241 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 USO1O60763 962 aaKnown RBP12.09□□□□□ -0.47
PVT1-216ENST00000523068 MED24O75448 989 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 GLP2RO95838 553 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 ALADP13716 330 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 NCLP19338 710 aaKnown RBP12.09□□□□□ -0.47
PVT1-216ENST00000523068 GLRA2P23416 452 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 MCM2P49736 904 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.47
PVT1-216ENST00000523068 ZP2Q05996 745 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 CAPSQ13938 189 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 GIT2Q14161 759 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 TMEM184AQ6ZMB5 413 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 AGMOQ6ZNB7 445 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 HACE1Q8IYU2 909 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 SMRP1Q8NCR6 262 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 FAM193BQ96PV7 902 aaPredicted RBP12.09□□□□□ -0.47
PVT1-216ENST00000523068 TRIM6Q9C030 488 aaPredicted RBP12.09□□□□□ -0.47
PVT1-216ENST00000523068 CD320Q9NPF0 282 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 CLEC1BQ9P126 229 aa12.09□□□□□ -0.47
PVT1-216ENST00000523068 C5orf42Q9H799 3197 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 ARHGEF35A5YM69 484 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 LRRIQ4A6NIV6 560 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 C19orf67A6NJJ6 358 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 MEIS3P2A8K0S8 358 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 NT5C1B-RDH14C9J2C7 533 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 GALTP07902 379 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 ITGA4P13612 1032 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 MBTD1Q05BQ5 628 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 BECN1Q14457 450 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 PDIA5Q14554 519 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 UBXN11Q5T124 520 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 POTEGQ6S5H5 508 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 DDX53Q86TM3 631 aaKnown RBP12.08□□□□□ -0.48
PVT1-216ENST00000523068 ZBTB8OSQ8IWT0 167 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 MRPL43Q8N983 215 aaKnown RBP12.08□□□□□ -0.48
PVT1-216ENST00000523068 TMEM87AQ8NBN3 555 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 ASAP3Q8TDY4 903 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 IGSF21Q96ID5 467 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 PRIMPOLQ96LW4 560 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 CSRNP2Q9H175 543 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 EPHX3Q9H6B9 360 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 NRDE2Q9H7Z3 1164 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 PRMT7Q9NVM4 692 aaPredicted RBP12.08□□□□□ -0.48
PVT1-216ENST00000523068 LRWD1Q9UFC0 647 aa12.08□□□□□ -0.48
PVT1-216ENST00000523068 BARX2Q9UMQ3 279 aaPredicted RBP12.08□□□□□ -0.48
PVT1-216ENST00000523068 A0A087WWV3 80 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 HIDE1A8MVS5 230 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 GPR37L1O60883 481 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 ALDH2P05091 517 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 HOXB8P17481 243 aaPredicted RBP12.07□□□□□ -0.48
PVT1-216ENST00000523068 COL9A1P20849 921 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 CA8P35219 290 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 CCT6AP40227 531 aaKnown RBP12.07□□□□□ -0.48
PVT1-216ENST00000523068 PTGDRQ13258 359 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 KCNC3Q14003 757 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 TMEM31Q5JXX7 168 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 MCTP1Q6DN14 999 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 SLC27A1Q6PCB7 646 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 MAEAQ7L5Y9 396 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 VPS52Q8N1B4 723 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 C4orf32Q8N8J7 132 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 SMG8Q8ND04 991 aaKnown RBP12.07□□□□□ -0.48
PVT1-216ENST00000523068 KHSRPQ92945 711 aaKnown RBP eCLIP12.07□□□□□ -0.48
PVT1-216ENST00000523068 CPB2Q96IY4 423 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 TMX3Q96JJ7 454 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 IPO9Q96P70 1041 aaKnown RBP12.07□□□□□ -0.48
PVT1-216ENST00000523068 TMEM175Q9BSA9 504 aa12.07□□□□□ -0.48
PVT1-216ENST00000523068 GBP3Q9H0R5 595 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms