RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 VN1R3Q9BXE9 311 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 NFKBIZQ9BYH8 718 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 SFXN1Q9H9B4 322 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 DPP7Q9UHL4 492 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 SSX2IPQ9Y2D8 614 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 PCDHB2Q9Y5E7 798 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 CYP46A1Q9Y6A2 500 aa10.52□□□□□ -0.73
SDC2-207ENST00000522911 DENND4AQ7Z401 1863 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 TMEM150BA6NC51 233 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 DDX11L8A8MPP1 907 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 NT5C1B-RDH14C9J2C7 533 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 EML1O00423 815 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 SLC37A4O43826 429 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 CDKL5O76039 1030 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 LYPLA2O95372 231 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 ALDH2P05091 517 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 NCLP19338 710 aaKnown RBP10.51□□□□□ -0.73
SDC2-207ENST00000522911 NBL1P41271 181 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 SLC11A1P49279 550 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 CLCN4P51793 760 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 RNASELQ05823 741 aaKnown RBP10.51□□□□□ -0.73
SDC2-207ENST00000522911 DSC1Q08554 894 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 SPIRE1Q08AE8 756 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 EPHA7Q15375 998 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 OTOP3Q7RTS5 596 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 NEK8Q86SG6 692 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 ZBTB33Q86T24 672 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 CABP7Q86V35 215 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 SKAP1Q86WV1 359 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 URGCPQ8TCY9 931 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 BCL7CQ8WUZ0 217 aaPredicted RBP10.51□□□□□ -0.73
SDC2-207ENST00000522911 TCP11Q8WWU5 503 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 PRPF31Q8WWY3 499 aaKnown RBP10.51□□□□□ -0.73
SDC2-207ENST00000522911 GJA10Q969M2 543 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 ZNF668Q96K58 619 aaPredicted RBP10.51□□□□□ -0.73
SDC2-207ENST00000522911 EMILIN2Q9BXX0 1053 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 RSAD1Q9HA92 442 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 DNAJB4Q9UDY4 337 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 DCHS1Q96JQ0 3298 aa10.51□□□□□ -0.73
SDC2-207ENST00000522911 MEIS3P2A8K0S8 358 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 B4GALT3O60512 393 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 SOD2P04179 222 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 EPCAMP16422 314 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 XBP1P17861 261 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 LAMTOR4Q0VGL1 99 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 MXD4Q14582 209 aaPredicted RBP10.5□□□□□ -0.73
SDC2-207ENST00000522911 INF2Q27J81 1249 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 UBXN11Q5T124 520 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 RARS2Q5T160 578 aaKnown RBP10.5□□□□□ -0.73
SDC2-207ENST00000522911 ASTLQ6HA08 431 aaPredicted RBP10.5□□□□□ -0.73
SDC2-207ENST00000522911 OTUD6AQ7L8S5 288 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 FERMT3Q86UX7 667 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 ZNF280BQ86YH2 543 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 KSR1Q8IVT5 923 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 SLFN12Q8IYM2 578 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 TMEM87AQ8NBN3 555 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 HAS1Q92839 578 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 LPPQ93052 612 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 NXPE3Q969Y0 559 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 ACSF2Q96CM8 615 aaPredicted RBP10.5□□□□□ -0.73
SDC2-207ENST00000522911 CEP170P1Q96L14 293 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 NLRP4Q96MN2 994 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 KLHL5Q96PQ7 755 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 ZSWIM4Q9H7M6 989 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 MINDY3Q9H8M7 445 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 RXFP1Q9HBX9 757 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 WRAP73Q9P2S5 460 aaPredicted RBP10.5□□□□□ -0.73
SDC2-207ENST00000522911 CDH22Q9UJ99 828 aa10.5□□□□□ -0.73
SDC2-207ENST00000522911 DBR1Q9UK59 544 aaKnown RBP10.5□□□□□ -0.73
SDC2-207ENST00000522911 WDR87Q6ZQQ6 2873 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 CCDC194A0A1B0GVG4 234 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 NRP1O14786 923 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 DDHD2O94830 711 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 PDGFBP01127 241 aaPredicted RBP10.49□□□□□ -0.73
SDC2-207ENST00000522911 CNPP09543 421 aaKnown RBP10.49□□□□□ -0.73
SDC2-207ENST00000522911 YWHABP31946 246 aaKnown RBP10.49□□□□□ -0.73
SDC2-207ENST00000522911 NPEPPSP55786 919 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 PTENP60484 403 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 LETM2Q2VYF4 491 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 PLA2G4FQ68DD2 849 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 NOTUMQ6P988 496 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 ELMSAN1Q6PJG2 1045 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 CCDC149Q6ZUS6 474 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 COLGALT2Q8IYK4 626 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 SMG8Q8ND04 991 aaKnown RBP10.49□□□□□ -0.73
SDC2-207ENST00000522911 RPS6KC1Q96S38 1066 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 SH2D3AQ9BRG2 576 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 LXNQ9BS40 222 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 HERC2P3Q9BVR0 1158 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 APOL5Q9BWW9 433 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 TSHZ2Q9NRE2 1034 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 MRPL17Q9NRX2 175 aaKnown RBP10.49□□□□□ -0.73
SDC2-207ENST00000522911 CHST7Q9NS84 486 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 IGSF9Q9P2J2 1179 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 DUSP12Q9UNI6 340 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 FAN1Q9Y2M0 1017 aa10.49□□□□□ -0.73
SDC2-207ENST00000522911 GFRA3O60609 400 aa10.48□□□□□ -0.73
SDC2-207ENST00000522911 PFKFB2O60825 505 aa10.48□□□□□ -0.73
SDC2-207ENST00000522911 ADH1AP07327 375 aa10.48□□□□□ -0.73
SDC2-207ENST00000522911 XRCC6P12956 609 aaKnown RBP eCLIP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms