RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 AMFRQ9UKV5 643 aa11.65□□□□□ -0.54
RAB11FIP1-204ENST00000522774 KRIT1O00522 736 aa11.65□□□□□ -0.54
RAB11FIP1-204ENST00000522774 CCDC172P0C7W6 258 aa11.65□□□□□ -0.54
RAB11FIP1-204ENST00000522774 ZKSCAN4Q969J2 545 aaPredicted RBP11.65□□□□□ -0.54
RAB11FIP1-204ENST00000522774 CALR3Q96L12 384 aaKnown RBP11.65□□□□□ -0.54
RAB11FIP1-204ENST00000522774 TCEAL9Q9UHQ7 104 aa11.65□□□□□ -0.54
RAB11FIP1-204ENST00000522774 COL11A1P12107 1806 aaPredicted RBP11.65□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CCDC169A6NNP5 214 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RPS6KA5O75582 802 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 KRT14P02533 472 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RFX1P22670 979 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 GMPSP49915 693 aaPredicted RBP11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MXI1P50539 228 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 JAK3P52333 1124 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PRAMEF18Q5VWM3 479 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ZNF746Q6NUN9 644 aaPredicted RBP11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 IQCKQ8N0W5 287 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TMEM161BQ8NDZ6 487 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 BSNDQ8WZ55 320 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TAF1DQ9H5J8 278 aaPredicted RBP11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ACP6Q9NPH0 428 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 NR2E1Q9Y466 385 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ANKRD62A6NC57 917 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ZNF233A6NK53 670 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 GOLGA8KD6RF30 607 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 NPTX2P47972 431 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 KRT76Q01546 638 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DALRD3Q5D0E6 543 aaKnown RBP11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MREGQ8N565 214 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SEMA4DQ92854 862 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ELMO3Q96BJ8 720 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RUFY1Q96T51 708 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ISCUQ9H1K1 167 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 NEUROG2Q9H2A3 272 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CHORDC1Q9UHD1 332 aaPredicted RBP11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 AMACRQ9UHK6 382 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DAAM1Q9Y4D1 1078 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 WDR81Q562E7 1941 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DOCK5Q9H7D0 1870 aa11.64□□□□□ -0.55
RAB11FIP1-204ENST00000522774 BHMG1C9JSJ3 638 aaPredicted RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 P4HA2O15460 535 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ZNF862O60290 1169 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 OPA1O60313 960 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ZBTB7AO95365 584 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SGPL1O95470 568 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 USP8P40818 1118 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MAP2K1Q02750 393 aaPredicted RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CETN1Q12798 172 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 HLTFQ14527 1009 aaKnown RBP eCLIP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CFAP58Q5T655 872 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 NAA35Q5VZE5 725 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RPUSD2Q8IZ73 545 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 KREMEN1Q96MU8 473 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 POP1Q99575 1024 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TBX20Q9UMR3 447 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RLFQ13129 1914 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 KIAA1217Q5T5P2 1943 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SRCAPQ6ZRS2 3230 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SORBS3O60504 671 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 RGS20O76081 388 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 FGGP02679 453 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 NR3C2P08235 984 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SFNP31947 248 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 BACE1P56817 501 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SNRNP35Q16560 246 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DNAJC21Q5F1R6 531 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 VSIG10LQ86VR7 867 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 FMNL3Q8IVF7 1028 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SH2D3CQ8N5H7 860 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SAMD3Q8N6K7 520 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 REPS2Q8NFH8 660 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 WHAMMQ8TF30 809 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CCDC127Q96BQ5 260 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PCDHB18PQ96TA0 734 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TIPINQ9BVW5 301 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MOV10L1Q9BXT6 1211 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CELF4Q9BZC1 486 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TOPORSQ9NS56 1045 aaPredicted RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ANKEF1Q9NU02 776 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 GJA3Q9Y6H8 435 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DOCK1Q14185 1865 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PFASO15067 1338 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 DENND3A2RUS2 1198 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SHOX2O60902 331 aaPredicted RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 FTLP02792 175 aaPredicted RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CHRNB2P17787 502 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SP4Q02446 784 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 PPFIA1Q13136 1202 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 KCTD16Q68DU8 428 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SNRNP48Q6IEG0 339 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 SLC39A4Q6P5W5 647 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 NOP9Q86U38 636 aaKnown RBP11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MAP4K3Q8IVH8 894 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 GINM1Q9NU53 330 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 GABBR1Q9UBS5 961 aa11.63□□□□□ -0.55
RAB11FIP1-204ENST00000522774 ADGRA3Q8IWK6 1321 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CCDC188H7C350 402 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 MAPK13O15264 365 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 TTI1O43156 1089 aa11.62□□□□□ -0.55
RAB11FIP1-204ENST00000522774 CNGA1P29973 690 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms