RNA–Protein interactions for RNA: ENST00000521683.5

CTNNA1-229, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-229ENST00000521683 TMEM175Q9BSA9 504 aa9.94□□□□□ -0.82
CTNNA1-229ENST00000521683 SLKQ9H2G2 1235 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-229ENST00000521683 ZSWIM4Q9H7M6 989 aa9.94□□□□□ -0.82
CTNNA1-229ENST00000521683 RSAD1Q9HA92 442 aa9.94□□□□□ -0.82
CTNNA1-229ENST00000521683 KANSL3Q9P2N6 904 aa9.94□□□□□ -0.82
CTNNA1-229ENST00000521683 SORCS3Q9UPU3 1222 aa9.94□□□□□ -0.82
CTNNA1-229ENST00000521683 USTQ9Y2C2 406 aa9.94□□□□□ -0.82
CTNNA1-229ENST00000521683 INPP5FQ9Y2H2 1132 aa9.94□□□□□ -0.82
CTNNA1-229ENST00000521683 PCDHB2Q9Y5E7 798 aa9.94□□□□□ -0.82
CTNNA1-229ENST00000521683 INPPL1O15357 1258 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 B4GALT3O60512 393 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 LYPLA2O95372 231 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 BAG4O95429 457 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 EPCAMP16422 314 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 NCLP19338 710 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 AXLP30530 894 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 HOXA11P31270 313 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 YWHABP31946 246 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 ANAPC15P60006 121 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 POU5F1BQ06416 359 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 TCF15Q12870 199 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 EMC2Q15006 297 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 ANKRD1Q15327 319 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 LONRF3Q496Y0 759 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 UBXN11Q5T124 520 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 RARS2Q5T160 578 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 IER5LQ5T953 404 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 FERMT3Q86UX7 667 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 ZNF280BQ86YH2 543 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 IFNLR1Q8IU57 520 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 ZDHHC14Q8IZN3 488 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 PLCD3Q8N3E9 789 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 ZNF579Q8NAF0 562 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 TDRD5Q8NAT2 981 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 TMEM87AQ8NBN3 555 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 KREMEN2Q8NCW0 462 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 CNNM3Q8NE01 707 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 OXER1Q8TDS5 423 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 AUTS2Q8WXX7 1259 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 TMEM143Q96AN5 459 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 CCDC51Q96ER9 411 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 VN1R3Q9BXE9 311 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 GBP3Q9H0R5 595 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 IRF2BPLQ9H1B7 796 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 MINDY3Q9H8M7 445 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 SFXN1Q9H9B4 322 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 UBN1Q9NPG3 1134 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 TSHZ2Q9NRE2 1034 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 DNAJB4Q9UDY4 337 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 CDH22Q9UJ99 828 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 DENND4AQ7Z401 1863 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 ARID2Q68CP9 1835 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 USP34Q70CQ2 3546 aa9.93□□□□□ -0.82
CTNNA1-229ENST00000521683 MYO10Q9HD67 2058 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 ZFHX2Q9C0A1 2572 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 MARCH6O60337 910 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 DDHD2O94830 711 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 CTDNEP1O95476 244 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 SRGAP2CP0DJJ0 459 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 SP100P23497 879 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 AVPR2P30518 371 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 VCPP55072 806 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 MXD4Q14582 209 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 XKR9Q5GH70 373 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 ATAT1Q5SQI0 421 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 NCAPH2Q6IBW4 605 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 NOTUMQ6P988 496 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 CABP7Q86V35 215 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 RNF149Q8NC42 400 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 TNFRSF25Q93038 417 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 DYDC2Q96IM9 177 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 MTRQ99707 1265 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 EMILIN2Q9BXX0 1053 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 BRMS1Q9HCU9 246 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 XPNPEP1Q9NQW7 623 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 RGL1Q9NZL6 768 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 ORC3Q9UBD5 711 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 TPCN1Q9ULQ1 816 aa9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 RIF1Q5UIP0 2472 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-229ENST00000521683 ZMYM2Q9UBW7 1377 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 DMDP11532 3685 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 MYO15AQ9UKN7 3530 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 NRP1O14786 923 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 TSPAN1O60635 241 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 LILRB3O75022 631 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 DGAT1O75907 488 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 ERLIN2O94905 339 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 BRD1O95696 1058 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 SOD2P04179 222 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 ALDH2P05091 517 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 ITGA4P13612 1032 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 KRT2P35908 639 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 CLCN4P51793 760 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 PTENP60484 403 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 CYP4A11Q02928 519 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 DSC1Q08554 894 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 TFDP1Q14186 410 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 EARS2Q5JPH6 523 aaKnown RBP9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 C15orf39Q6ZRI6 1047 aa9.91□□□□□ -0.82
CTNNA1-229ENST00000521683 GPR149Q86SP6 731 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms