RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 RNF168Q8IYW5 571 aaPredicted RBP8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 SLC39A7Q92504 469 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 GPRASP2Q96D09 838 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 VAT1LQ9HCJ6 419 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 COL4A2P08572 1712 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 DOCK6Q96HP0 2047 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 H0Y626 953 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 GAS2O43903 313 aaKnown RBP8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 AKAP3O75969 853 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 TRIM16O95361 564 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 SEC24BO95487 1268 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 SPATA31D3P0C874 917 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 SRSF1Q07955 248 aaKnown RBP eCLIP8.7□□□□□ -1.024e-7■■■■□ 22.6
HMBOX1-208ENST00000521516 SPATA31D4Q6ZUB0 917 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 GRASPQ7Z6J2 395 aaPredicted RBP8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 DGKHQ86XP1 1220 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 DEFB124Q8NES8 71 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 FAM3CQ92520 227 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 CDHR1Q96JP9 859 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 MKNK1Q9BUB5 465 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 PLA2G2FQ9BZM2 168 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 AZI2Q9H6S1 392 aa8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 ANKRD17O75179 2603 aaKnown RBP8.7□□□□□ -1.02
HMBOX1-208ENST00000521516 LNP1A1A4G5 178 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 C2CD2LO14523 706 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 ZBTB5O15062 677 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 TGM5O43548 720 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 DHX16O60231 1041 aaKnown RBP8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 NTHL1P78549 312 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 NOMO2Q5JPE7 1267 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 RRP12Q5JTH9 1297 aaKnown RBP8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 PNMA1Q8ND90 353 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 ITFG1Q8TB96 612 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 TRAIPQ9BWF2 469 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 TRPV5Q9NQA5 729 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 CACNA1EQ15878 2313 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 PCNX2A6NKB5 2137 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 COL1A2P08123 1366 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 CCDC163A0A0D9SF12 145 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 CDX4O14627 284 aaPredicted RBP8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 RPP40O75818 363 aaKnown RBP8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 ALX1Q15699 326 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 ZMYM1Q5SVZ6 1142 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 ZKSCAN2Q63HK3 967 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 TAS1R1Q7RTX1 841 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 NPAS3Q8IXF0 933 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 MBOAT7Q96N66 472 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 TMEM9BQ9NQ34 198 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 TOMM22Q9NS69 142 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 ECHDC1Q9NTX5 307 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 C2orf42Q9NWW7 574 aa8.69□□□□□ -1.02
HMBOX1-208ENST00000521516 ZBTB42B2RXF5 422 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 ATXN7O15265 892 aaPredicted RBP8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 HOXC13P31276 330 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 GLUD2P49448 558 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 SLC26A2P50443 739 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 STAT5BP51692 787 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 DSG1Q02413 1049 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 GLB1LQ6UWU2 654 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 RAB44Q7Z6P3 723 aaPredicted RBP8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 GPR65Q8IYL9 337 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 ZNF843Q8N446 348 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 LSM14AQ8ND56 463 aaKnown RBP8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 PPP1R16BQ96T49 567 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 TMEM175Q9BSA9 504 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 CCDC86Q9H6F5 360 aaKnown RBP8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 DACT1Q9NYF0 836 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 KCNH3Q9ULD8 1083 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 WDR81Q562E7 1941 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 HBP1O60381 514 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 OFD1O75665 1012 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 POU2F2P09086 479 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 HNRNPA1P09651 372 aaKnown RBP eCLIP8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 PARP1P09874 1014 aaKnown RBP8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 EIF4BP23588 611 aaKnown RBP8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 TRAF1Q13077 416 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 PALB2Q86YC2 1186 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 ELSPBP1Q96BH3 223 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 BCL11AQ9H165 835 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 RAXQ9Y2V3 346 aa8.68□□□□□ -1.02
HMBOX1-208ENST00000521516 MYO9AB2RTY4 2548 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 C22orf31O95567 290 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 VTNP04004 478 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 ITGB5P18084 799 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 PHKA2P46019 1235 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 MLLT6P55198 1093 aaPredicted RBP8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 RNASELQ05823 741 aaKnown RBP8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 LRRC32Q14392 662 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 PLK5Q496M5 336 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 ZNF484Q5JVG2 852 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 MAP4K3Q8IVH8 894 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 CLMPQ9H6B4 373 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 JPH1Q9HDC5 661 aaPredicted RBP8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 CHST7Q9NS84 486 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 MARCH5Q9NX47 278 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 FNIP2Q9P278 1114 aa8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 ASCC3Q8N3C0 2202 aaKnown RBP8.67□□□□□ -1.02
HMBOX1-208ENST00000521516 BCLAF3A2AJT9 711 aaKnown RBP8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 DDHD2O94830 711 aa8.66□□□□□ -1.02
HMBOX1-208ENST00000521516 CAVIN2O95810 425 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms