RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ITGB1P05556 798 aa22.82■■□□□ 1.24
TRIM35-203ENST00000521253 PDIA4P13667 645 aaKnown RBP22.82■■□□□ 1.24
TRIM35-203ENST00000521253 KARSQ15046 597 aaKnown RBP22.82■■□□□ 1.24
TRIM35-203ENST00000521253 SPECC1Q5M775 1068 aa22.82■■□□□ 1.24
TRIM35-203ENST00000521253 LRRC15Q8TF66 581 aa22.82■■□□□ 1.24
TRIM35-203ENST00000521253 CLIC6Q96NY7 704 aa22.82■■□□□ 1.24
TRIM35-203ENST00000521253 AAASQ9NRG9 546 aa22.82■■□□□ 1.24
TRIM35-203ENST00000521253 PCDHB12Q9Y5F1 795 aa22.82■■□□□ 1.24
TRIM35-203ENST00000521253 ZSCAN22P10073 491 aaPredicted RBP22.81■■□□□ 1.24
TRIM35-203ENST00000521253 LAG3P18627 525 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 PLCG1P19174 1290 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 GUCY2CP25092 1073 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 NASPP49321 788 aaPredicted RBP22.81■■□□□ 1.24
TRIM35-203ENST00000521253 MAPK7Q13164 816 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 PKP1Q13835 747 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 SLC39A14Q15043 492 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 SKIV2LQ15477 1246 aaKnown RBP22.81■■□□□ 1.24
TRIM35-203ENST00000521253 FAM187BQ17R55 369 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 GLB1LQ6UWU2 654 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 AGMOQ6ZNB7 445 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 USP49Q70CQ1 688 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 COLGALT1Q8NBJ5 622 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 SMG8Q8ND04 991 aaKnown RBP22.81■■□□□ 1.24
TRIM35-203ENST00000521253 RASSF8Q8NHQ8 419 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 SPPL3Q8TCT6 385 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 EPSTI1Q96J88 318 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 PRIMPOLQ96LW4 560 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 DRC1Q96MC2 740 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 MRPL9Q9BYD2 267 aaKnown RBP22.81■■□□□ 1.24
TRIM35-203ENST00000521253 CCSER1Q9C0I3 900 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 CCDC113Q9H0I3 377 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 LMAN2LQ9H0V9 348 aa22.81■■□□□ 1.24
TRIM35-203ENST00000521253 MORC2Q9Y6X9 1032 aaPredicted RBP22.81■■□□□ 1.24
TRIM35-203ENST00000521253 A0A1B0GUA9 196 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 OFD1O75665 1012 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 PRKCBP05771 671 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 NCLP19338 710 aaKnown RBP22.8■■□□□ 1.24
TRIM35-203ENST00000521253 RAD51AP2Q09MP3 1159 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 CAMK1Q14012 370 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 MAPK6Q16659 721 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 CDR2LQ86X02 465 aaPredicted RBP22.8■■□□□ 1.24
TRIM35-203ENST00000521253 RSPH1Q8WYR4 309 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 TIPINQ9BVW5 301 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 BLOC1S4Q9NUP1 217 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 INPP5FQ9Y2H2 1132 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 IPPQ9Y573 584 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 CNTNAP2Q9UHC6 1331 aa22.8■■□□□ 1.24
TRIM35-203ENST00000521253 TTLL13PA6NNM8 815 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 CSPG5O95196 566 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 F13A1P00488 732 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 LIG1P18858 919 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 DNAJB1P25685 340 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 PBX3P40426 434 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 NPTX2P47972 431 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 EFNA5P52803 228 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 PEX3P56589 373 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 TIGD5Q53EQ6 642 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 NOMO2Q5JPE7 1267 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 SLC27A1Q6PCB7 646 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 CNNM3Q8NE01 707 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 SYMPKQ92797 1274 aaKnown RBP22.79■■□□□ 1.24
TRIM35-203ENST00000521253 ZNF396Q96N95 335 aaPredicted RBP22.79■■□□□ 1.24
TRIM35-203ENST00000521253 RSAD1Q9HA92 442 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 KCND2Q9NZV8 630 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 TFIP11Q9UBB9 837 aaKnown RBP22.79■■□□□ 1.24
TRIM35-203ENST00000521253 USP20Q9Y2K6 914 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 HES2Q9Y543 173 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 KIAA1671Q9BY89 1806 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 VCANP13611 3396 aa22.79■■□□□ 1.24
TRIM35-203ENST00000521253 CCDC169A6NNP5 214 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 SFI1A8K8P3 1242 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 ACKR2O00590 384 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 EDN1P05305 212 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 ITGA4P13612 1032 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 AFF1P51825 1210 aaKnown RBP22.78■■□□□ 1.24
TRIM35-203ENST00000521253 DMP1Q13316 513 aaPredicted RBP22.78■■□□□ 1.24
TRIM35-203ENST00000521253 PRPF4BQ13523 1007 aaKnown RBP22.78■■□□□ 1.24
TRIM35-203ENST00000521253 CSPP1Q1MSJ5 1256 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 ARSHQ5FYA8 562 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 KCNT2Q6UVM3 1135 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 THNSL1Q8IYQ7 743 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 KRI1Q8N9T8 703 aaKnown RBP22.78■■□□□ 1.24
TRIM35-203ENST00000521253 LINC00301Q8NCQ3 95 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 POF1BQ8WVV4 589 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 TRIM6Q9C030 488 aaPredicted RBP22.78■■□□□ 1.24
TRIM35-203ENST00000521253 RNF39Q9H2S5 420 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 TBC1D13Q9NVG8 400 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 THEGQ9P2T0 379 aa22.78■■□□□ 1.24
TRIM35-203ENST00000521253 NPHP3-ACAD11A0A0J9YXS1 232 aa22.77■■□□□ 1.24
TRIM35-203ENST00000521253 FGF18O76093 207 aa22.77■■□□□ 1.24
TRIM35-203ENST00000521253 NPTXRO95502 500 aa22.77■■□□□ 1.24
TRIM35-203ENST00000521253 DHX8Q14562 1220 aaKnown RBP22.77■■□□□ 1.24
TRIM35-203ENST00000521253 MCM6Q14566 821 aa22.77■■□□□ 1.24
TRIM35-203ENST00000521253 STK38Q15208 465 aa22.77■■□□□ 1.24
TRIM35-203ENST00000521253 FOXD4L6Q3SYB3 417 aaPredicted RBP22.77■■□□□ 1.24
TRIM35-203ENST00000521253 TCEAL5Q5H9L2 206 aa22.77■■□□□ 1.24
TRIM35-203ENST00000521253 FOXD4L3Q6VB84 417 aaPredicted RBP22.77■■□□□ 1.24
TRIM35-203ENST00000521253 RAD54LQ92698 747 aa22.77■■□□□ 1.24
TRIM35-203ENST00000521253 ZNF558Q96NG5 402 aa22.77■■□□□ 1.24
TRIM35-203ENST00000521253 NXF3Q9H4D5 531 aaKnown RBP22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms