RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 NCBP1Q09161 790 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 SPOUT1Q5T280 376 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 KRT79Q5XKE5 535 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 ARL6IP4Q66PJ3 421 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 TWF2Q6IBS0 349 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 PADI6Q6TGC4 694 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 MRPL10Q7Z7H8 261 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 ABI1Q8IZP0 508 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 KLHL23Q8NBE8 558 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 SPPL3Q8TCT6 385 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 HLA-CQ95604 372 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 PGBD4Q96DM1 585 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 ASB2Q96Q27 587 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 NSUN3Q9H649 340 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 CWH43Q9H720 699 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 MINDY3Q9H8M7 445 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 AGPAT5Q9NUQ2 364 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 RNF19AQ9NV58 838 aa11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 DAXXQ9UER7 740 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 PIN4Q9Y237 131 aaKnown RBP11.55□□□□□ -0.56
TRAPPC9-209ENST00000521167 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 ARHGEF35A5YM69 484 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 CARNS1A5YM72 827 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 USO1O60763 962 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 ERLIN2O94905 339 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 BMP15O95972 392 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 ITGB1P05556 798 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 ATF7P17544 494 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 LAG3P18627 525 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 GLRA2P23416 452 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 HOXA11P31270 313 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 UBE3AQ05086 875 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 CAPSQ13938 189 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 IL17AQ16552 155 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 CLLU1OSQ5K130 101 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 LRRC43Q8N309 656 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 RNF169Q8NCN4 708 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 CNNM3Q8NE01 707 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 ASAP3Q8TDY4 903 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 SNX29Q8TEQ0 813 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 SNX21Q969T3 373 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 CCDC51Q96ER9 411 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 MRPL9Q9BYD2 267 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 POLR3FQ9H1D9 316 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 FAM105AQ9NUU6 356 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 KIAA1024Q9UPX6 916 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 DNM3Q9UQ16 869 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 UNC80Q8N2C7 3258 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 TDRD15B5MCY1 1934 aaKnown RBP11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 EYSQ5T1H1 3165 aa11.54□□□□□ -0.56
TRAPPC9-209ENST00000521167 K7ELQ4 463 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 SLC26A4O43511 780 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 HRO43593 1189 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 EYA4O95677 639 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 ECM1Q16610 540 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 LRRC55Q6ZSA7 311 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 COLGALT1Q8NBJ5 622 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 HELQQ8TDG4 1101 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 PPP2R3CQ969Q6 453 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 COL25A1Q9BXS0 654 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 C2orf40Q9H1Z8 148 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 ALG13Q9NP73 1137 aaKnown RBP11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 DDX19AQ9NUU7 478 aaKnown RBP11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 PCDHB2Q9Y5E7 798 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 CNTNAP2Q9UHC6 1331 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 REV3LO60673 3130 aa11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 SPTBN5Q9NRC6 3674 aaKnown RBP11.53□□□□□ -0.56
TRAPPC9-209ENST00000521167 TRIP11Q15643 1979 aa11.52□□□□□ -0.56
TRAPPC9-209ENST00000521167 INO80B-WBP1J3KQ70 363 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 TSPAN1O60635 241 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 NCLP19338 710 aaKnown RBP11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 PPM1AP35813 382 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 PLCB3Q01970 1234 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 MBTD1Q05BQ5 628 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 CAMK1Q14012 370 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 COL19A1Q14993 1142 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 PPP2R5AQ15172 486 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 FAM187BQ17R55 369 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 TCEAL5Q5H9L2 206 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 HYIQ5T013 277 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 UBXN11Q5T124 520 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 PDE12Q6L8Q7 609 aaKnown RBP11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 NOTUMQ6P988 496 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 KCNT2Q6UVM3 1135 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 GLB1LQ6UWU2 654 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 MAEAQ7L5Y9 396 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 THNSL1Q8IYQ7 743 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 POF1BQ8WVV4 589 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 KIFAP3Q92845 792 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 PRIMPOLQ96LW4 560 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 AK8Q96MA6 479 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 ZNF558Q96NG5 402 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 MMTAG2Q9BU76 263 aaKnown RBP11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 BHMT2Q9H2M3 363 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 UBN1Q9NPG3 1134 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 KANSL3Q9P2N6 904 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 PUF60Q9UHX1 559 aaKnown RBP11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 LZTS1Q9Y250 596 aa11.52□□□□□ -0.57
TRAPPC9-209ENST00000521167 BDP1A6H8Y1 2624 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms