RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 MYLIPQ8WY64 445 aa17.98■□□□□ 0.47
TNPO1-212ENST00000520850 CASD1Q96PB1 797 aa17.98■□□□□ 0.47
TNPO1-212ENST00000520850 PLIN2Q99541 437 aa17.98■□□□□ 0.47
TNPO1-212ENST00000520850 RNF19AQ9NV58 838 aa17.98■□□□□ 0.47
TNPO1-212ENST00000520850 LARSQ9P2J5 1176 aaKnown RBP17.98■□□□□ 0.47
TNPO1-212ENST00000520850 ARHGAP28Q9P2N2 729 aa17.98■□□□□ 0.47
TNPO1-212ENST00000520850 PCDHB2Q9Y5E7 798 aa17.98■□□□□ 0.47
TNPO1-212ENST00000520850 CNTNAP2Q9UHC6 1331 aa17.98■□□□□ 0.47
TNPO1-212ENST00000520850 MYO9BQ13459 2157 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 RALGAPA2Q2PPJ7 1873 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 ZMYM2Q9UBW7 1377 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 H0YCG3 227 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 LPXNO60711 386 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 ABCD1P33897 745 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 ZNF131P52739 623 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 SMTNP53814 917 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 DNM1Q05193 864 aaKnown RBP17.97■□□□□ 0.47
TNPO1-212ENST00000520850 CSPP1Q1MSJ5 1256 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 SPECC1Q5M775 1068 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 RASSF8Q8NHQ8 419 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 LRRC15Q8TF66 581 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 ARNTL2Q8WYA1 636 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 C17orf80Q9BSJ5 609 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 CUEDC2Q9H467 287 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 TRANK1O15050 2925 aa17.97■□□□□ 0.47
TNPO1-212ENST00000520850 FNDC1Q4ZHG4 1894 aaPredicted RBP17.97■□□□□ 0.47
TNPO1-212ENST00000520850 K7ERI5 159 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 INPPL1O15357 1258 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 FOSL2P15408 326 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 PEX3P56589 373 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 KRT85P78386 507 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 ADGRE1Q14246 886 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 FOXD4L5Q5VV16 416 aaPredicted RBP17.96■□□□□ 0.47
TNPO1-212ENST00000520850 SLC27A1Q6PCB7 646 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 ABI1Q8IZP0 508 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 SLC17A8Q8NDX2 589 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 FBXO22Q8NEZ5 403 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 FOXD4L4Q8WXT5 416 aaPredicted RBP17.96■□□□□ 0.47
TNPO1-212ENST00000520850 MRPL9Q9BYD2 267 aaKnown RBP17.96■□□□□ 0.47
TNPO1-212ENST00000520850 LMAN2LQ9H0V9 348 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 KMT5AQ9NQR1 393 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 AAASQ9NRG9 546 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 KANSL3Q9P2N6 904 aa17.96■□□□□ 0.47
TNPO1-212ENST00000520850 COL6A3P12111 3177 aa17.95■□□□□ 0.46
TNPO1-212ENST00000520850 EPOPA6NHQ4 379 aa17.95■□□□□ 0.46
TNPO1-212ENST00000520850 TBKBP1A7MCY6 615 aa17.95■□□□□ 0.46
TNPO1-212ENST00000520850 SSBP05455 408 aaKnown RBP eCLIP17.95■□□□□ 0.46
TNPO1-212ENST00000520850 PRPF4BQ13523 1007 aaKnown RBP17.95■□□□□ 0.46
TNPO1-212ENST00000520850 GIT2Q14161 759 aa17.95■□□□□ 0.46
TNPO1-212ENST00000520850 MCM6Q14566 821 aa17.95■□□□□ 0.46
TNPO1-212ENST00000520850 CLLU1OSQ5K130 101 aa17.95■□□□□ 0.46
TNPO1-212ENST00000520850 SV2BQ7L1I2 683 aa17.95■□□□□ 0.46
TNPO1-212ENST00000520850 GPBP1Q86WP2 473 aa17.95■□□□□ 0.46
TNPO1-212ENST00000520850 HACE1Q8IYU2 909 aa17.95■□□□□ 0.46
TNPO1-212ENST00000520850 PYM1Q9BRP8 204 aaKnown RBP17.95■□□□□ 0.46
TNPO1-212ENST00000520850 C11orf84Q9BUA3 381 aaPredicted RBP17.95■□□□□ 0.46
TNPO1-212ENST00000520850 SCAND2PQ9GZW5 306 aaPredicted RBP17.95■□□□□ 0.46
TNPO1-212ENST00000520850 PCDHA7Q9UN72 937 aa17.95■□□□□ 0.46
TNPO1-212ENST00000520850 MRPL42Q9Y6G3 142 aaKnown RBP17.95■□□□□ 0.46
TNPO1-212ENST00000520850 CCDC169A6NNP5 214 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 N4BP3O15049 544 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 GTPBP6O43824 516 aaPredicted RBP17.94■□□□□ 0.46
TNPO1-212ENST00000520850 OFD1O75665 1012 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 PRKCBP05771 671 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 FGFR1P11362 822 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 ADALQ6DHV7 355 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 SHC4Q6S5L8 630 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 GLB1LQ6UWU2 654 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 AGMOQ6ZNB7 445 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 LRRC43Q8N309 656 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 SMG8Q8ND04 991 aaKnown RBP17.94■□□□□ 0.46
TNPO1-212ENST00000520850 TMEM161BQ8NDZ6 487 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 REEP2Q9BRK0 252 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 LRRC27Q9C0I9 530 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 CWH43Q9H720 699 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 CERS4Q9HA82 394 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 PARVGQ9HBI0 331 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 POLD4Q9HCU8 107 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 TYW1Q9NV66 732 aaKnown RBP17.94■□□□□ 0.46
TNPO1-212ENST00000520850 GIT1Q9Y2X7 761 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 IPPQ9Y573 584 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 MTCH2Q9Y6C9 303 aa17.94■□□□□ 0.46
TNPO1-212ENST00000520850 SFI1A8K8P3 1242 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 MAPTP10636 758 aaKnown RBP17.93■□□□□ 0.46
TNPO1-212ENST00000520850 LAG3P18627 525 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 ME1P48163 572 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 GATMP50440 423 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 NCKAP1LP55160 1127 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 UBE3AQ05086 875 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 GPM6BQ13491 265 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 E2F4Q16254 413 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 LRRC55Q6ZSA7 311 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 APBB1IPQ7Z5R6 666 aaPredicted RBP17.93■□□□□ 0.46
TNPO1-212ENST00000520850 SPRED2Q7Z698 418 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 IQUBQ8NA54 791 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 CPB2Q96IY4 423 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 ST6GALNAC4Q9H4F1 302 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 PTPRHQ9HD43 1115 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 TNFSF13BQ9Y275 285 aa17.93■□□□□ 0.46
TNPO1-212ENST00000520850 PCDHB12Q9Y5F1 795 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms