RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 TMEM240Q5SV17 173 aa6.79□□□□□ -1.32
LINC00535-204ENST00000520513 NOL8Q76FK4 1167 aaKnown RBP6.79□□□□□ -1.32
LINC00535-204ENST00000520513 RTKN2Q8IZC4 609 aa6.79□□□□□ -1.32
LINC00535-204ENST00000520513 RTF1Q92541 710 aaKnown RBP6.79□□□□□ -1.32
LINC00535-204ENST00000520513 ZNF503Q96F45 646 aa6.79□□□□□ -1.32
LINC00535-204ENST00000520513 ZNF496Q96IT1 587 aaPredicted RBP6.79□□□□□ -1.32
LINC00535-204ENST00000520513 FAXDC2Q96IV6 333 aa6.79□□□□□ -1.32
LINC00535-204ENST00000520513 PUF60Q9UHX1 559 aaKnown RBP6.79□□□□□ -1.32
LINC00535-204ENST00000520513 ING1Q9UK53 422 aaPredicted RBP6.79□□□□□ -1.32
LINC00535-204ENST00000520513 CTDP1Q9Y5B0 961 aaPredicted RBP6.79□□□□□ -1.32
LINC00535-204ENST00000520513 FZD9O00144 591 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 MAFGO15525 162 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 RFPL1O75677 317 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 ABLIM3O94929 683 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 SNUPNO95149 360 aaKnown RBP6.78□□□□□ -1.32
LINC00535-204ENST00000520513 U2AF1L5P0DN76 240 aaPredicted RBP6.78□□□□□ -1.32
LINC00535-204ENST00000520513 ENPP1P22413 925 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 MSX2P35548 267 aaPredicted RBP6.78□□□□□ -1.32
LINC00535-204ENST00000520513 RECQLP46063 649 aaPredicted RBP6.78□□□□□ -1.32
LINC00535-204ENST00000520513 GPR3P46089 330 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 HMGA2P52926 109 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 SCAND1P57086 179 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 U2AF1Q01081 240 aaKnown RBP eCLIP6.78□□□□□ -1.32
LINC00535-204ENST00000520513 KLF10Q13118 480 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 FOXE3Q13461 319 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 PGM2L1Q6PCE3 622 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 CXorf67Q86X51 503 aaPredicted RBP6.78□□□□□ -1.32
LINC00535-204ENST00000520513 IL17DQ8TAD2 202 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 RSAD2Q8WXG1 361 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 C8orf48Q96LL4 319 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 PCED1AQ9H1Q7 454 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 MKS1Q9NXB0 559 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 PLA2G3Q9NZ20 509 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 ZIM2Q9NZV7 527 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 FAM184BQ9ULE4 1060 aa6.78□□□□□ -1.32
LINC00535-204ENST00000520513 SCGB1D2O95969 90 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 MT-CO1P00395 513 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 MTHFD2P13995 350 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 VCAM1P19320 739 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 RPS19P39019 145 aaKnown RBP6.77□□□□□ -1.33
LINC00535-204ENST00000520513 MEOX1P50221 254 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 MANFP55145 182 aaKnown RBP6.77□□□□□ -1.33
LINC00535-204ENST00000520513 ADAM8P78325 824 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 SLC6A3Q01959 620 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 PDCD1Q15116 288 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 MIIPQ5JXC2 388 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 SPTY2D1Q68D10 685 aaPredicted RBP6.77□□□□□ -1.33
LINC00535-204ENST00000520513 RAVER1Q8IY67 606 aaKnown RBP6.77□□□□□ -1.33
LINC00535-204ENST00000520513 WDR48Q8TAF3 677 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 FAM89AQ96GI7 184 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 TUBGCP5Q96RT8 1024 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 HS3ST3A1Q9Y663 406 aa6.77□□□□□ -1.33
LINC00535-204ENST00000520513 ST20-MTHFSA0A0A6YYL1 179 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 C2orf78A6NCI8 922 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 NPIPB8E9PQR5 432 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 SUV39H1O43463 412 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 SLC26A4O43511 780 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 PRPF6O94906 941 aaKnown RBP6.76□□□□□ -1.33
LINC00535-204ENST00000520513 C1SP09871 688 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 ATP2C1P98194 919 aaPredicted RBP6.76□□□□□ -1.33
LINC00535-204ENST00000520513 NRN1LQ496H8 165 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 NXNQ6DKJ4 435 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 SLFN12LQ6IEE8 588 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 KIAA1841Q6NSI8 718 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 KANSL1Q7Z3B3 1105 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 PNMA8AQ86V59 439 aaPredicted RBP6.76□□□□□ -1.33
LINC00535-204ENST00000520513 CHPFQ8IZ52 775 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 FERMT2Q96AC1 680 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 TMEM176AQ96HP8 235 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 RAX2Q96IS3 184 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 MRIQ9BWK5 157 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 MS4A5Q9H3V2 200 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 CCM2LQ9NUG4 571 aaPredicted RBP6.76□□□□□ -1.33
LINC00535-204ENST00000520513 ZNF180Q9UJW8 692 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 GIT1Q9Y2X7 761 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 LUC7L2Q9Y383 392 aaKnown RBP6.76□□□□□ -1.33
LINC00535-204ENST00000520513 NUMBLQ9Y6R0 609 aa6.76□□□□□ -1.33
LINC00535-204ENST00000520513 KLHL33A6NCF5 533 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 BCAR1P56945 870 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 MRPS9P82933 396 aaKnown RBP6.75□□□□□ -1.33
LINC00535-204ENST00000520513 ADCY2Q08462 1091 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 RIN1Q13671 783 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 MYBPC3Q14896 1274 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 UGT8Q16880 541 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 CXorf57Q6NSI4 855 aaKnown RBP6.75□□□□□ -1.33
LINC00535-204ENST00000520513 CPA6Q8N4T0 437 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 SHCBP1Q8NEM2 672 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 OR5AN1Q8NGI8 311 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 RPGRQ92834 1020 aaKnown RBP6.75□□□□□ -1.33
LINC00535-204ENST00000520513 NKD2Q969F2 451 aaPredicted RBP6.75□□□□□ -1.33
LINC00535-204ENST00000520513 NUP88Q99567 741 aaPredicted RBP6.75□□□□□ -1.33
LINC00535-204ENST00000520513 MYL10Q9BUA6 226 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 KRTAP17-1Q9BYP8 105 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 POFUT1Q9H488 388 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 TLR9Q9NR96 1032 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 PNMA8BQ9ULN7 279 aaPredicted RBP6.75□□□□□ -1.33
LINC00535-204ENST00000520513 PPP2R3BQ9Y5P8 575 aa6.75□□□□□ -1.33
LINC00535-204ENST00000520513 KIF3BO15066 747 aa6.74□□□□□ -1.33
LINC00535-204ENST00000520513 ZSCAN20P17040 1043 aaPredicted RBP6.74□□□□□ -1.33
LINC00535-204ENST00000520513 ADCY7P51828 1080 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 158.8 ms