RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 NRDE2Q9H7Z3 1164 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 CRB1P82279 1406 aa12.88□□□□□ -0.35
ERGIC1-208ENST00000520399 ASNSP08243 561 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 RAD23BP54727 409 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 PEX3P56589 373 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 PSMC1P62191 440 aaKnown RBP12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 SCARA5Q6ZMJ2 495 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 TOGARAM2Q6ZUX3 1019 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 RHOT2Q8IXI1 618 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 GIMAP8Q8ND71 665 aaPredicted RBP12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 FAM149B1Q96BN6 582 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 ZFATQ9P243 1243 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 KIF17Q9P2E2 1029 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 ARHGEF37A1IGU5 675 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 AHCYL1O43865 530 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 ADRA2BP18089 450 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 CDC27P30260 824 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 PDCLQ13371 301 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 SPOPLQ6IQ16 392 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 SZRD1Q7Z422 152 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 CCNYQ8ND76 341 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 ALKBH8Q96BT7 664 aaKnown RBP12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 CLMNQ96JQ2 1002 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 GJB4Q9NTQ9 266 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 SFI1A8K8P3 1242 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 C21orf2O43822 256 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 GPSM2P81274 684 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 EMBQ6PCB8 327 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 C1orf228Q6PIY5 440 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 SYNE4Q8N205 404 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 PHF21AQ96BD5 680 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 ANKRD27Q96NW4 1050 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 PPP1R16BQ96T49 567 aa12.87□□□□□ -0.35
ERGIC1-208ENST00000520399 POTEMA6NI47 508 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 LGALS16A8MUM7 142 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 E7ENQ6 273 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 PRR29P0C7W0 189 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 SRGAP2CP0DJJ0 459 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 HSPA9P38646 679 aaKnown RBP12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 MLH1P40692 756 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 EPHB1P54762 984 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 HDAC4P56524 1084 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 WASHC5Q12768 1159 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 FOXD4Q12950 439 aaPredicted RBP12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 COASYQ13057 564 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 PLEKHM3Q6ZWE6 761 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 TAGAPQ8N103 731 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 TRIM8Q9BZR9 551 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 ABHD10Q9NUJ1 306 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 NDUFA13Q9P0J0 144 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 MCM8Q9UJA3 840 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 USP17L10C9JJH3 530 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 RASGRF2O14827 1237 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 MARK3P27448 753 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 PMS1P54277 932 aaKnown RBP12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 Q3C1V9 767 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 NLRP14Q86W24 1093 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 SFR1Q86XK3 245 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 FMR1NBQ8N0W7 255 aaPredicted RBP12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 SIX6OS1Q8N1H7 587 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 PIGOQ8TEQ8 1089 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 CELF1Q92879 486 aaKnown RBP12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 AP1M1Q9BXS5 423 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 ATP11BQ9Y2G3 1177 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 CLTCQ00610 1675 aaKnown RBP12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 UBN2Q6ZU65 1347 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 TAC1P20366 129 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 CACNB3P54284 484 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 CUL1Q13616 776 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 DHX38Q92620 1227 aaKnown RBP12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 CFAP36Q96G28 342 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 CD248Q9HCU0 757 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 DNAJC12Q9UKB3 198 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 TRIM49BA6NDI0 452 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 PRR23D1E9PI22 279 aaPredicted RBP12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 PRR23D2P0DMB1 279 aaPredicted RBP12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 RSRC2Q7L4I2 434 aaKnown RBP12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 FLCNQ8NFG4 579 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 MXD3Q9BW11 206 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 SLC7A5P2Q9GIP4 190 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 LRRC4Q9HBW1 653 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 FGFR1OP2Q9NVK5 253 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 TMEM260Q9NX78 707 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 BARHL2Q9NY43 387 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 HACD3Q9P035 362 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 LCMT1Q9UIC8 334 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 PNMA3Q9UL41 463 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 CHMP2BQ9UQN3 213 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 SLC4A7Q9Y6M7 1214 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 PXDNLA1KZ92 1463 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 K7ERI5 159 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 TMEM259Q4ZIN3 620 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 RC3H1Q5TC82 1133 aaKnown RBP12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 IL17RAQ96F46 866 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 CEP95Q96GE4 821 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 CATSPER2Q96P56 530 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 PIM2Q9P1W9 311 aa12.86□□□□□ -0.35
ERGIC1-208ENST00000520399 LMTK2Q8IWU2 1503 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 ADCY3O60266 1144 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms