RNA–Protein interactions for RNA: ENST00000519643.5

SH3PXD2B-203, Transcript of SH3 and PX domains 2B, humanhuman

TSL 1 (best) BASIC

Gene SH3PXD2B, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-203ENST00000519643 SYCP3Q8IZU3 236 aa16.55■□□□□ 0.24
SH3PXD2B-203ENST00000519643 AP5M1Q9H0R1 490 aa16.55■□□□□ 0.24
SH3PXD2B-203ENST00000519643 IKZF4Q9H2S9 585 aa16.55■□□□□ 0.24
SH3PXD2B-203ENST00000519643 ADGRA3Q8IWK6 1321 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 DENND3A2RUS2 1198 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 H3BRB1 525 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 CLIC2O15247 247 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 ADAMTS4O75173 837 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 PRKCSHP14314 528 aaPredicted RBP16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 RAG1P15918 1043 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 SCP2P22307 547 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 GLRA2P23416 452 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 DNAJB2P25686 324 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 ABCD1P33897 745 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 NAMPTP43490 491 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 MARSP56192 900 aaKnown RBP16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 CCDC40Q4G0X9 1142 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 TJAP1Q5JTD0 557 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 TRAPPC12Q8WVT3 735 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 TCP11Q8WWU5 503 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 KIFC3Q9BVG8 833 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 TUT1Q9H6E5 874 aaKnown RBP16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 AGPAT3Q9NRZ7 376 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 CGNQ9P2M7 1197 aaKnown RBP16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 ARHGAP28Q9P2N2 729 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 TBX20Q9UMR3 447 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 CHD9Q3L8U1 2897 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 SIP14410 1827 aa16.54■□□□□ 0.24
SH3PXD2B-203ENST00000519643 SLC16A3O15427 465 aaKnown RBP16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 INSRRP14616 1297 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 CPT1AP50416 773 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 SNRPFP62306 86 aaKnown RBP16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 FPGSQ05932 587 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 FAAP100Q0VG06 881 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 MYBPC2Q14324 1141 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 MAN2A1Q16706 1144 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 PTPN21Q16825 1174 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 MIIPQ5JXC2 388 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 SPECC1LQ69YQ0 1117 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 RNF180Q86T96 592 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 MAP4K3Q8IVH8 894 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 KCNN1Q92952 543 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 NOC4LQ9BVI4 516 aaKnown RBP16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 DMAC2Q9NW81 257 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 EXOC7Q9UPT5 735 aa16.53■□□□□ 0.24
SH3PXD2B-203ENST00000519643 BDP1A6H8Y1 2624 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 DUSP11O75319 330 aaKnown RBP16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 C22orf31O95567 290 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 DNM2P50570 870 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 GSDMDP57764 484 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 UBXN1Q04323 297 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 MKRN4PQ13434 485 aaPredicted RBP16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 DRP2Q13474 957 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 BRDTQ58F21 947 aaPredicted RBP16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 ANKRD33Q7Z3H0 272 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 SLC9A9Q8IVB4 645 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 C12orf56Q8IXR9 622 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 DEPTORQ8TB45 409 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 TMEM174Q8WUU8 243 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 PRPF31Q8WWY3 499 aaKnown RBP16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 PSPC1Q8WXF1 523 aaKnown RBP16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 SUGCTQ9HAC7 445 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 TMEM39AQ9NV64 488 aa16.52■□□□□ 0.24
SH3PXD2B-203ENST00000519643 ITIH6Q6UXX5 1313 aa16.52■□□□□ 0.23
SH3PXD2B-203ENST00000519643 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 LRRIQ4A6NIV6 560 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 PES1O00541 588 aaKnown RBP16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 MAGEB2O15479 319 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 F2P00734 622 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 EPB41P11171 864 aaKnown RBP16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 IGBP1P78318 339 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 TBX2Q13207 712 aaPredicted RBP16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 CAPSQ13938 189 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 VWA3BQ502W6 1294 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 TAS1R3Q7RTX0 852 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 FRMD5Q7Z6J6 570 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 TRIM59Q8IWR1 403 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 LRRC71Q8N4P6 559 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 TOX2Q96NM4 488 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 MKNK1Q9BUB5 465 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 ZNF576Q9H609 170 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 SUCLA2Q9P2R7 463 aaPredicted RBP16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 TBX21Q9UL17 535 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 TNFRSF10AO00220 468 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 AKAP3O75969 853 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 COL9A1P20849 921 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 KLRC1P26715 233 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 CASP4P49662 377 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 CYP2J2P51589 502 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 ACLYP53396 1101 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 IRX5P78411 483 aaPredicted RBP16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 LAMTOR4Q0VGL1 99 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 PPFIA1Q13136 1202 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 MXD4Q14582 209 aaPredicted RBP16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 GRIK4Q16099 956 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 FSCN1Q16658 493 aaKnown RBP16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 CEP135Q66GS9 1140 aa16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 CCSAPQ6IQ19 270 aaPredicted RBP16.51■□□□□ 0.23
SH3PXD2B-203ENST00000519643 EFCAB12Q6NXP0 572 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms