RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 GAGE13Q4V321 117 aa8.23□□□□□ -1.09
PTPN12-213ENST00000519553 BTNL9Q6UXG8 535 aa8.23□□□□□ -1.09
PTPN12-213ENST00000519553 TAS1R1Q7RTX1 841 aa8.23□□□□□ -1.09
PTPN12-213ENST00000519553 GPR135Q8IZ08 494 aa8.23□□□□□ -1.09
PTPN12-213ENST00000519553 ANKRD53Q8N9V6 530 aa8.23□□□□□ -1.09
PTPN12-213ENST00000519553 RABGGTAQ92696 567 aa8.23□□□□□ -1.09
PTPN12-213ENST00000519553 CHMP4CQ96CF2 233 aa8.23□□□□□ -1.09
PTPN12-213ENST00000519553 TEKT5Q96M29 485 aa8.23□□□□□ -1.09
PTPN12-213ENST00000519553 PUS7Q96PZ0 661 aaKnown RBP8.23□□□□□ -1.09
PTPN12-213ENST00000519553 CEP89Q96ST8 783 aa8.23□□□□□ -1.09
PTPN12-213ENST00000519553 ING3Q9NXR8 418 aa8.23□□□□□ -1.09
PTPN12-213ENST00000519553 TUBD1Q9UJT1 453 aa8.23□□□□□ -1.09
PTPN12-213ENST00000519553 XPOTO43592 962 aaKnown RBP8.22□□□□□ -1.09
PTPN12-213ENST00000519553 ALDH1A2O94788 518 aa8.22□□□□□ -1.09
PTPN12-213ENST00000519553 LTA4HP09960 611 aaKnown RBP8.22□□□□□ -1.09
PTPN12-213ENST00000519553 CR2P20023 1033 aa8.22□□□□□ -1.09
PTPN12-213ENST00000519553 CTSSP25774 331 aa8.22□□□□□ -1.09
PTPN12-213ENST00000519553 MCL1Q07820 350 aa8.22□□□□□ -1.09
PTPN12-213ENST00000519553 MALLQ13021 153 aa8.22□□□□□ -1.09
PTPN12-213ENST00000519553 ABHD15Q6UXT9 468 aa8.22□□□□□ -1.09
PTPN12-213ENST00000519553 ADGRE4PQ86SQ3 457 aa8.22□□□□□ -1.09
PTPN12-213ENST00000519553 FATE1Q969F0 183 aa8.22□□□□□ -1.09
PTPN12-213ENST00000519553 GNRHR2Q96P88 292 aa8.22□□□□□ -1.09
PTPN12-213ENST00000519553 RBM15Q96T37 977 aaKnown RBP eCLIP8.22□□□□□ -1.09
PTPN12-213ENST00000519553 AGO3Q9H9G7 860 aaKnown RBP8.22□□□□□ -1.09
PTPN12-213ENST00000519553 DMRT3Q9NQL9 472 aa8.22□□□□□ -1.09
PTPN12-213ENST00000519553 THRAP3Q9Y2W1 955 aaKnown RBP8.22□□□□□ -1.09
PTPN12-213ENST00000519553 KLHL33A6NCF5 533 aa8.21□□□□□ -1.1
PTPN12-213ENST00000519553 GPR42O15529 346 aa8.21□□□□□ -1.1
PTPN12-213ENST00000519553 CDC14BO60729 498 aa8.21□□□□□ -1.1
PTPN12-213ENST00000519553 C5AR1P21730 350 aa8.21□□□□□ -1.1
PTPN12-213ENST00000519553 PPP3CAQ08209 521 aa8.21□□□□□ -1.1
PTPN12-213ENST00000519553 RIN1Q13671 783 aa8.21□□□□□ -1.1
PTPN12-213ENST00000519553 UBE3CQ15386 1083 aa8.21□□□□□ -1.1
PTPN12-213ENST00000519553 ODR4Q5SWX8 454 aa8.21□□□□□ -1.1
PTPN12-213ENST00000519553 ZBTB46Q86UZ6 589 aa8.21□□□□□ -1.1
PTPN12-213ENST00000519553 PAWRQ96IZ0 340 aaKnown RBP8.21□□□□□ -1.1
PTPN12-213ENST00000519553 RPL10LQ96L21 214 aaKnown RBP8.21□□□□□ -1.1
PTPN12-213ENST00000519553 MSL2Q9HCI7 577 aa8.21□□□□□ -1.1
PTPN12-213ENST00000519553 ZNF536O15090 1300 aa8.21□□□□□ -1.1
PTPN12-213ENST00000519553 JUNP05412 331 aaKnown RBP8.2□□□□□ -1.1
PTPN12-213ENST00000519553 MCAMP43121 646 aa8.2□□□□□ -1.1
PTPN12-213ENST00000519553 NFIXQ14938 502 aa8.2□□□□□ -1.1
PTPN12-213ENST00000519553 ACAP2Q15057 778 aa8.2□□□□□ -1.1
PTPN12-213ENST00000519553 LIMS2Q7Z4I7 341 aa8.2□□□□□ -1.1
PTPN12-213ENST00000519553 PNMA8AQ86V59 439 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-213ENST00000519553 TAX1BP1Q86VP1 789 aa8.2□□□□□ -1.1
PTPN12-213ENST00000519553 LILRA3Q8N6C8 439 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-213ENST00000519553 SHCBP1Q8NEM2 672 aa8.2□□□□□ -1.1
PTPN12-213ENST00000519553 SNX33Q8WV41 574 aa8.2□□□□□ -1.1
PTPN12-213ENST00000519553 C12orf65Q9H3J6 166 aaKnown RBP8.2□□□□□ -1.1
PTPN12-213ENST00000519553 GREM2Q9H772 168 aa8.2□□□□□ -1.1
PTPN12-213ENST00000519553 TLR9Q9NR96 1032 aa8.2□□□□□ -1.1
PTPN12-213ENST00000519553 MRFAP1Q9Y605 127 aa8.2□□□□□ -1.1
PTPN12-213ENST00000519553 PRAMEF4O60810 478 aa8.19□□□□□ -1.1
PTPN12-213ENST00000519553 NDUFS2O75306 463 aa8.19□□□□□ -1.1
PTPN12-213ENST00000519553 ZRANB2O95218 330 aaKnown RBP eCLIP8.19□□□□□ -1.1
PTPN12-213ENST00000519553 WNT3AP56704 352 aa8.19□□□□□ -1.1
PTPN12-213ENST00000519553 MST1LQ2TV78 715 aa8.19□□□□□ -1.1
PTPN12-213ENST00000519553 C19orf54Q5BKX5 351 aa8.19□□□□□ -1.1
PTPN12-213ENST00000519553 MUM1L1Q5H9M0 696 aa8.19□□□□□ -1.1
PTPN12-213ENST00000519553 RAVER1Q8IY67 606 aaKnown RBP8.19□□□□□ -1.1
PTPN12-213ENST00000519553 RIN2Q8WYP3 895 aaPredicted RBP8.19□□□□□ -1.1
PTPN12-213ENST00000519553 HOXB13Q92826 284 aaPredicted RBP8.19□□□□□ -1.1
PTPN12-213ENST00000519553 HOOK2Q96ED9 719 aa8.19□□□□□ -1.1
PTPN12-213ENST00000519553 PLA2G12BQ9BX93 195 aa8.19□□□□□ -1.1
PTPN12-213ENST00000519553 IL23AQ9NPF7 189 aa8.19□□□□□ -1.1
PTPN12-213ENST00000519553 NPEPPSL1A6NEC2 478 aa8.18□□□□□ -1.1
PTPN12-213ENST00000519553 S100BP04271 92 aaPredicted RBP8.18□□□□□ -1.1
PTPN12-213ENST00000519553 ITGB3P05106 788 aa8.18□□□□□ -1.1
PTPN12-213ENST00000519553 TMEM240Q5SV17 173 aa8.18□□□□□ -1.1
PTPN12-213ENST00000519553 KRT40Q6A162 431 aa8.18□□□□□ -1.1
PTPN12-213ENST00000519553 TCTN3Q6NUS6 607 aa8.18□□□□□ -1.1
PTPN12-213ENST00000519553 ENKD1Q9H0I2 346 aa8.18□□□□□ -1.1
PTPN12-213ENST00000519553 RPTORQ8N122 1335 aa8.18□□□□□ -1.1
PTPN12-213ENST00000519553 RECQLP46063 649 aaPredicted RBP8.17□□□□□ -1.1
PTPN12-213ENST00000519553 CTSWP56202 376 aa8.17□□□□□ -1.1
PTPN12-213ENST00000519553 MGAT2Q10469 447 aa8.17□□□□□ -1.1
PTPN12-213ENST00000519553 PIN1Q13526 163 aaPredicted RBP8.17□□□□□ -1.1
PTPN12-213ENST00000519553 Q6ZVL8 140 aa8.17□□□□□ -1.1
PTPN12-213ENST00000519553 CMTR2Q8IYT2 770 aaKnown RBP8.17□□□□□ -1.1
PTPN12-213ENST00000519553 PPM1NQ8N819 430 aa8.17□□□□□ -1.1
PTPN12-213ENST00000519553 GPR156Q8NFN8 814 aa8.17□□□□□ -1.1
PTPN12-213ENST00000519553 OR2I1PQ8NGU4 316 aa8.17□□□□□ -1.1
PTPN12-213ENST00000519553 CXorf38Q8TB03 319 aa8.17□□□□□ -1.1
PTPN12-213ENST00000519553 BDH2Q9BUT1 245 aa8.17□□□□□ -1.1
PTPN12-213ENST00000519553 RBM12Q9NTZ6 932 aaKnown RBP8.17□□□□□ -1.1
PTPN12-213ENST00000519553 LUC7L2Q9Y383 392 aaKnown RBP8.17□□□□□ -1.1
PTPN12-213ENST00000519553 ARID1BQ8NFD5 2236 aaPredicted RBP8.17□□□□□ -1.1
PTPN12-213ENST00000519553 FOXS1O43638 330 aa8.16□□□□□ -1.1
PTPN12-213ENST00000519553 ABLIM3O94929 683 aa8.16□□□□□ -1.1
PTPN12-213ENST00000519553 CCND1P24385 295 aa8.16□□□□□ -1.1
PTPN12-213ENST00000519553 EPHB1P54762 984 aa8.16□□□□□ -1.1
PTPN12-213ENST00000519553 EFCAB2Q5VUJ9 269 aa8.16□□□□□ -1.1
PTPN12-213ENST00000519553 GLB1LQ6UWU2 654 aa8.16□□□□□ -1.1
PTPN12-213ENST00000519553 CIR1Q86X95 450 aaPredicted RBP8.16□□□□□ -1.1
PTPN12-213ENST00000519553 CMTM4Q8IZR5 234 aa8.16□□□□□ -1.1
PTPN12-213ENST00000519553 FUKQ8N0W3 1084 aa8.16□□□□□ -1.1
PTPN12-213ENST00000519553 CPA6Q8N4T0 437 aa8.16□□□□□ -1.1
PTPN12-213ENST00000519553 DNERQ8NFT8 737 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms